Literature DB >> 12496934

Creation of a zymogen.

Parit Plainkum1, Stephen M Fuchs, Suthep Wiyakrutta, Ronald T Raines.   

Abstract

Cells produce proteases as inactive zymogens. Here, we demonstrate that this tactic can extend beyond proteases. By linking the N and C termini of ribonuclease A, we obstruct the active site with the amino acid sequence recognized by plasmepsin II, a highly specific protease from Plasmodium falciparum. We generate new N and C termini by circular permutation. In the presence of plasmepsin II, a ribonuclease zymogen gains approximately 10(3)-fold in catalytic activity and maintains high conformational stability. We conclude that zymogen creation provides a new and versatile strategy for the control of enzymatic activity, as well as the potential development of chemotherapeutic agents.

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Year:  2003        PMID: 12496934      PMCID: PMC2819095          DOI: 10.1038/nsb884

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  28 in total

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Authors:  Ronald T. Raines
Journal:  Chem Rev       Date:  1998-05-07       Impact factor: 60.622

Review 2.  Cancer chemotherapy--ribonucleases to the rescue.

Authors:  P A Leland; R T Raines
Journal:  Chem Biol       Date:  2001-05

Review 3.  The peptidase zymogen proregions: nature's way of preventing undesired activation and proteolysis.

Authors:  Claude Lazure
Journal:  Curr Pharm Des       Date:  2002       Impact factor: 3.116

4.  High level expression and characterisation of Plasmepsin II, an aspartic proteinase from Plasmodium falciparum.

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Journal:  FEBS Lett       Date:  1994-09-26       Impact factor: 4.124

5.  Phase II trial of a single weekly intravenous dose of ranpirnase in patients with unresectable malignant mesothelioma.

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Journal:  J Clin Oncol       Date:  2002-01-01       Impact factor: 44.544

6.  Engineering ribonuclease A: production, purification and characterization of wild-type enzyme and mutants at Gln11.

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Journal:  Protein Eng       Date:  1995-03

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Authors:  P A Leland; L W Schultz; B M Kim; R T Raines
Journal:  Proc Natl Acad Sci U S A       Date:  1998-09-01       Impact factor: 11.205

8.  Structure and inhibition of plasmepsin II, a hemoglobin-degrading enzyme from Plasmodium falciparum.

Authors:  A M Silva; A Y Lee; S V Gulnik; P Maier; J Collins; T N Bhat; P J Collins; R E Cachau; K E Luker; I Y Gluzman; S E Francis; A Oksman; D E Goldberg; J W Erickson
Journal:  Proc Natl Acad Sci U S A       Date:  1996-09-17       Impact factor: 11.205

9.  Circular and circularly permuted forms of bovine pancreatic trypsin inhibitor.

Authors:  D P Goldenberg; T E Creighton
Journal:  J Mol Biol       Date:  1983-04-05       Impact factor: 5.469

10.  Hemoglobin degradation in the human malaria pathogen Plasmodium falciparum: a catabolic pathway initiated by a specific aspartic protease.

Authors:  D E Goldberg; A F Slater; R Beavis; B Chait; A Cerami; G B Henderson
Journal:  J Exp Med       Date:  1991-04-01       Impact factor: 14.307

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  21 in total

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3.  Engineering carboxypeptidase G2 circular permutations for the design of an autoinhibited enzyme.

Authors:  Brahm J Yachnin; Sagar D Khare
Journal:  Protein Eng Des Sel       Date:  2017-04-01       Impact factor: 1.650

4.  Engineering an artificial zymogen by alternate frame protein folding.

Authors:  Diana M Mitrea; Lee S Parsons; Stewart N Loh
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-26       Impact factor: 11.205

5.  Protease-based synthetic sensing and signal amplification.

Authors:  Viktor Stein; Kirill Alexandrov
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-29       Impact factor: 11.205

6.  Rational design and evaluation of mammalian ribonuclease cytotoxins.

Authors:  Jo E Lomax; Chelcie H Eller; Ronald T Raines
Journal:  Methods Enzymol       Date:  2012       Impact factor: 1.600

7.  CRISPR-Cas9 Circular Permutants as Programmable Scaffolds for Genome Modification.

Authors:  Benjamin L Oakes; Christof Fellmann; Harneet Rishi; Kian L Taylor; Shawn M Ren; Dana C Nadler; Rayka Yokoo; Adam P Arkin; Jennifer A Doudna; David F Savage
Journal:  Cell       Date:  2019-01-10       Impact factor: 41.582

8.  The Structure of a Thermophilic Kinase Shapes Fitness upon Random Circular Permutation.

Authors:  Alicia M Jones; Manan M Mehta; Emily E Thomas; Joshua T Atkinson; Thomas H Segall-Shapiro; Shirley Liu; Jonathan J Silberg
Journal:  ACS Synth Biol       Date:  2016-03-25       Impact factor: 5.110

9.  Silencing an inhibitor unleashes a cytotoxic enzyme.

Authors:  Kimberly A Dickson; Ronald T Raines
Journal:  Biochemistry       Date:  2009-06-16       Impact factor: 3.162

10.  Structural and thermodynamic analysis of a conformationally strained circular permutant of barnase.

Authors:  James S Butler; Diana M Mitrea; Gregory Mitrousis; Gino Cingolani; Stewart N Loh
Journal:  Biochemistry       Date:  2009-04-21       Impact factor: 3.162

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