Literature DB >> 21956907

Inflammation: cytokines and RNA-based regulation.

Deborah J Stumpo1, Wi S Lai, Perry J Blackshear.   

Abstract

The outcome of an inflammatory response depends upon the coordinated regulation of a variety of both pro-inflammatory and anti-inflammatory cytokines and other proteins. Regulation of these inflammation mediators can occur at multiple levels, including transcription, mRNA translation, post-translational modifications, and mRNA degradation. Post-transcriptional regulation has been shown to play an important role in controlling the expression of these mediators, allowing for normal initiation and resolution of the inflammatory response. Many inflammatory mediators have unstable mRNAs due, in part, to the presence of AU-rich elements in their 3'-untranslated regions. Increasing numbers of RNA-binding proteins have been identified that can bind to these AU-rich elements and then regulate the stability and/or translation of the mRNA. This review summarizes current knowledge about the role of several RNA-binding proteins that act through AU-rich elements to post-transcriptionally regulate the biosynthesis of proteins involved in inflammation. 2010 John Wiley & Sons, Ltd.

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Year:  2010        PMID: 21956907      PMCID: PMC3915420          DOI: 10.1002/wrna.1

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev RNA        ISSN: 1757-7004            Impact factor:   9.957


  195 in total

Review 1.  AU-rich elements: characterization and importance in mRNA degradation.

Authors:  C Y Chen; A B Shyu
Journal:  Trends Biochem Sci       Date:  1995-11       Impact factor: 13.807

2.  Individual RNA recognition motifs of TIA-1 and TIAR have different RNA binding specificities.

Authors:  L M Dember; N D Kim; K Q Liu; P Anderson
Journal:  J Biol Chem       Date:  1996-02-02       Impact factor: 5.157

3.  Cloning and characterization of HuR, a ubiquitously expressed Elav-like protein.

Authors:  W J Ma; S Cheng; C Campbell; A Wright; H Furneaux
Journal:  J Biol Chem       Date:  1996-04-05       Impact factor: 5.157

4.  Nuclear import and export functions in the different isoforms of the AUF1/heterogeneous nuclear ribonucleoprotein protein family.

Authors:  Bedabrata Sarkar; Jin-Yu Lu; Robert J Schneider
Journal:  J Biol Chem       Date:  2003-03-31       Impact factor: 5.157

5.  A conserved family of elav-like genes in vertebrates.

Authors:  P J Good
Journal:  Proc Natl Acad Sci U S A       Date:  1995-05-09       Impact factor: 11.205

6.  A novel mechanism of tumor suppression by destabilizing AU-rich growth factor mRNA.

Authors:  Georg Stoecklin; Brigitte Gross; Xiu-Fen Ming; Christoph Moroni
Journal:  Oncogene       Date:  2003-06-05       Impact factor: 9.867

7.  Phosphorylation of tristetraprolin, a potential zinc finger transcription factor, by mitogen stimulation in intact cells and by mitogen-activated protein kinase in vitro.

Authors:  G A Taylor; M J Thompson; W S Lai; P J Blackshear
Journal:  J Biol Chem       Date:  1995-06-02       Impact factor: 5.157

8.  apobec-1, the catalytic subunit of the mammalian apolipoprotein B mRNA editing enzyme, is a novel RNA-binding protein.

Authors:  S Anant; A J MacGinnitie; N O Davidson
Journal:  J Biol Chem       Date:  1995-06-16       Impact factor: 5.157

9.  Mutagenesis of apobec-1, the catalytic subunit of the mammalian apolipoprotein B mRNA editing enzyme, reveals distinct domains that mediate cytosine nucleoside deaminase, RNA binding, and RNA editing activity.

Authors:  A J MacGinnitie; S Anant; N O Davidson
Journal:  J Biol Chem       Date:  1995-06-16       Impact factor: 5.157

10.  RNA-binding protein HuR enhances p53 translation in response to ultraviolet light irradiation.

Authors:  Krystyna Mazan-Mamczarz; Stefanie Galbán; Isabel López de Silanes; Jennifer L Martindale; Ulus Atasoy; Jack D Keene; Myriam Gorospe
Journal:  Proc Natl Acad Sci U S A       Date:  2003-06-23       Impact factor: 12.779

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  25 in total

1.  Licensed human natural killer cells aid dendritic cell maturation via TNFSF14/LIGHT.

Authors:  Tim D Holmes; Erica B Wilson; Emma V I Black; Andrew V Benest; Candida Vaz; Betty Tan; Vivek M Tanavde; Graham P Cook
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-15       Impact factor: 11.205

Review 2.  The role of cold shock domain proteins in inflammatory diseases.

Authors:  Jonathan A Lindquist; Sabine Brandt; Anja Bernhardt; Cheng Zhu; Peter R Mertens
Journal:  J Mol Med (Berl)       Date:  2014-02-22       Impact factor: 4.599

Review 3.  Post-transcriptional regulation of cytokine signaling by AU-rich and GU-rich elements.

Authors:  Irina Vlasova-St Louis; Paul R Bohjanen
Journal:  J Interferon Cytokine Res       Date:  2014-04       Impact factor: 2.607

4.  Importance of the Conserved Carboxyl-Terminal CNOT1 Binding Domain to Tristetraprolin Activity In Vivo.

Authors:  Wi S Lai; Deborah J Stumpo; Melissa L Wells; Artiom Gruzdev; Stephanie N Hicks; Cindo O Nicholson; Zhengfeng Yang; Roberta Faccio; Michael W Webster; Lori A Passmore; Perry J Blackshear
Journal:  Mol Cell Biol       Date:  2019-06-13       Impact factor: 4.272

5.  Zinc finger protein tristetraprolin interacts with CCL3 mRNA and regulates tissue inflammation.

Authors:  Ju-Gyeong Kang; Marcelo J Amar; Alan T Remaley; Jaeyul Kwon; Perry J Blackshear; Ping-yuan Wang; Paul M Hwang
Journal:  J Immunol       Date:  2011-07-22       Impact factor: 5.422

Review 6.  RNA regulatory mechanisms that control antiviral innate immunity.

Authors:  Nandan S Gokhale; Julian R Smith; Rachel D Van Gelder; Ram Savan
Journal:  Immunol Rev       Date:  2021-08-17       Impact factor: 12.988

7.  Transforming growth factor β regulates P-body formation through induction of the mRNA decay factor tristetraprolin.

Authors:  Fernando F Blanco; Sandhya Sanduja; Natasha G Deane; Perry J Blackshear; Dan A Dixon
Journal:  Mol Cell Biol       Date:  2013-11-04       Impact factor: 4.272

8.  Regulation of p21/CIP1/WAF-1 mediated cell-cycle arrest by RNase L and tristetraprolin, and involvement of AU-rich elements.

Authors:  Latifa Al-Haj; Perry J Blackshear; Khalid S A Khabar
Journal:  Nucleic Acids Res       Date:  2012-06-19       Impact factor: 16.971

9.  Not1 mediates recruitment of the deadenylase Caf1 to mRNAs targeted for degradation by tristetraprolin.

Authors:  Heike Sandler; Jochen Kreth; H Th Marc Timmers; Georg Stoecklin
Journal:  Nucleic Acids Res       Date:  2011-01-29       Impact factor: 16.971

10.  Identification of common regulators of genes in co-expression networks affecting muscle and meat properties.

Authors:  Siriluck Ponsuksili; Puntita Siengdee; Yang Du; Nares Trakooljul; Eduard Murani; Manfred Schwerin; Klaus Wimmers
Journal:  PLoS One       Date:  2015-04-14       Impact factor: 3.240

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