Literature DB >> 11447124

The exosome of Trypanosoma brucei.

A M Estévez1, T Kempf, C Clayton.   

Abstract

The yeast exosome is a complex of at least 10 essential 3'-5' riboexonucleases which is involved in 3'-processing of many RNA species. An exosome-like complex has been found or predicted to exist in other eukaryotes but not in Escherichia coli. The unicellular parasite Trypanosoma brucei diverged very early in eukaryotic evolution. We show here that T.brucei contains at least eight exosome subunit homologs, but only a subset of these associate in a complex. Accordingly, the T.brucei exosome is smaller than that of yeast. Both free and complex-associated homologs are essential for cell viability and are involved in 5.8S rRNA maturation. We suggest that the exosome was present in primitive eukaryotes, and became increasingly complex during subsequent evolution.

Entities:  

Mesh:

Substances:

Year:  2001        PMID: 11447124      PMCID: PMC125547          DOI: 10.1093/emboj/20.14.3831

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  35 in total

Review 1.  The exosome: a proteasome for RNA?

Authors:  A van Hoof; R Parker
Journal:  Cell       Date:  1999-11-12       Impact factor: 41.582

2.  AU-rich elements in the 3'-untranslated region of a new mucin-type gene family of Trypanosoma cruzi confers mRNA instability and modulates translation efficiency.

Authors:  J M Di Noia; I D'Orso; D O Sánchez; A C Frasch
Journal:  J Biol Chem       Date:  2000-04-07       Impact factor: 5.157

3.  Genetic interference in Trypanosoma brucei by heritable and inducible double-stranded RNA.

Authors:  H Shi; A Djikeng; T Mark; E Wirtz; C Tschudi; E Ullu
Journal:  RNA       Date:  2000-07       Impact factor: 4.942

Review 4.  Musing on the structural organization of the exosome complex.

Authors:  P Mitchell; D Tollervey
Journal:  Nat Struct Biol       Date:  2000-10

5.  Poly(A) tail-dependent exonuclease AtRrp41p from Arabidopsis thaliana rescues 5.8 S rRNA processing and mRNA decay defects of the yeast ski6 mutant and is found in an exosome-sized complex in plant and yeast cells.

Authors:  J A Chekanova; R J Shaw; M A Wills; D A Belostotsky
Journal:  J Biol Chem       Date:  2000-10-20       Impact factor: 5.157

6.  Function of the ski4p (Csl4p) and Ski7p proteins in 3'-to-5' degradation of mRNA.

Authors:  A van Hoof; R R Staples; R E Baker; R Parker
Journal:  Mol Cell Biol       Date:  2000-11       Impact factor: 4.272

7.  Prediction of the archaeal exosome and its connections with the proteasome and the translation and transcription machineries by a comparative-genomic approach.

Authors:  E V Koonin; Y I Wolf; L Aravind
Journal:  Genome Res       Date:  2001-02       Impact factor: 9.043

8.  Three novel components of the human exosome.

Authors:  R Brouwer; C Allmang; R Raijmakers; Y van Aarssen; W V Egberts; E Petfalski; W J van Venrooij; D Tollervey; G J Pruijn
Journal:  J Biol Chem       Date:  2000-11-10       Impact factor: 5.157

9.  The exosome: a conserved eukaryotic RNA processing complex containing multiple 3'-->5' exoribonucleases.

Authors:  P Mitchell; E Petfalski; A Shevchenko; M Mann; D Tollervey
Journal:  Cell       Date:  1997-11-14       Impact factor: 41.582

10.  Inhibition of Trypanosoma brucei gene expression by RNA interference using an integratable vector with opposing T7 promoters.

Authors:  Z Wang; J C Morris; M E Drew; P T Englund
Journal:  J Biol Chem       Date:  2000-12-22       Impact factor: 5.157

View more
  89 in total

1.  Degradation of the unstable EP1 mRNA in Trypanosoma brucei involves initial destruction of the 3'-untranslated region.

Authors:  H Irmer; C Clayton
Journal:  Nucleic Acids Res       Date:  2001-11-15       Impact factor: 16.971

Review 2.  Life without transcriptional control? From fly to man and back again.

Authors:  Christine E Clayton
Journal:  EMBO J       Date:  2002-04-15       Impact factor: 11.598

3.  Role of uridylate-specific exoribonuclease activity in Trypanosoma brucei RNA editing.

Authors:  Robert P Igo; David S Weston; Nancy Lewis Ernst; Aswini K Panigrahi; Reza Salavati; Kenneth Stuart
Journal:  Eukaryot Cell       Date:  2002-02

Review 4.  MRNA stability and the control of gene expression: implications for human disease.

Authors:  Elysia M Hollams; Keith M Giles; Andrew M Thomson; Peter J Leedman
Journal:  Neurochem Res       Date:  2002-10       Impact factor: 3.996

5.  A role for the exosome in the in vivo degradation of unstable mRNAs.

Authors:  Simon Haile; Antonio M Estevez; Christine Clayton
Journal:  RNA       Date:  2003-12       Impact factor: 4.942

6.  A complex prediction: three-dimensional model of the yeast exosome.

Authors:  Patrick Aloy; Francesca D Ciccarelli; Christina Leutwein; Anne-Claude Gavin; Giulio Superti-Furga; Peer Bork; Bettina Bottcher; Robert B Russell
Journal:  EMBO Rep       Date:  2002-07       Impact factor: 8.807

7.  The structure of Ski8p, a protein regulating mRNA degradation: Implications for WD protein structure.

Authors:  A Yarrow Madrona; David K Wilson
Journal:  Protein Sci       Date:  2004-06       Impact factor: 6.725

8.  Identification of mRNA decapping activities and an ARE-regulated 3' to 5' exonuclease activity in trypanosome extracts.

Authors:  Joseph Milone; Jeffrey Wilusz; Vivian Bellofatto
Journal:  Nucleic Acids Res       Date:  2002-09-15       Impact factor: 16.971

9.  Identification and characterization of nuclear non-canonical poly(A) polymerases from Trypanosoma brucei.

Authors:  Ronald D Etheridge; Daniel M Clemens; Paul D Gershon; Ruslan Aphasizhev
Journal:  Mol Biochem Parasitol       Date:  2008-11-25       Impact factor: 1.759

10.  The 3'-untranslated region of cytochrome oxidase II mRNA functions in RNA editing of African trypanosomes exclusively as a cis guide RNA.

Authors:  Daniel E Golden; Stephen L Hajduk
Journal:  RNA       Date:  2004-12-01       Impact factor: 4.942

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.