Literature DB >> 12134146

Systematic screen for human disease genes in yeast.

Lars M Steinmetz1, Curt Scharfe, Adam M Deutschbauer, Dejana Mokranjac, Zelek S Herman, Ted Jones, Angela M Chu, Guri Giaever, Holger Prokisch, Peter J Oefner, Ronald W Davis.   

Abstract

High similarity between yeast and human mitochondria allows functional genomic study of Saccharomyces cerevisiae to be used to identify human genes involved in disease. So far, 102 heritable disorders have been attributed to defects in a quarter of the known nuclear-encoded mitochondrial proteins in humans. Many mitochondrial diseases remain unexplained, however, in part because only 40-60% of the presumed 700-1,000 proteins involved in mitochondrial function and biogenesis have been identified. Here we apply a systematic functional screen using the pre-existing whole-genome pool of yeast deletion mutants to identify mitochondrial proteins. Three million measurements of strain fitness identified 466 genes whose deletions impaired mitochondrial respiration, of which 265 were new. Our approach gave higher selection than other systematic approaches, including fivefold greater selection than gene expression analysis. To apply these advantages to human disorders involving mitochondria, human orthologs were identified and linked to heritable diseases using genomic map positions.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 12134146     DOI: 10.1038/ng929

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  225 in total

1.  Phosphate and succinate use different mechanisms to inhibit sugar-induced cell death in yeast: insight into the Crabtree effect.

Authors:  Yong Joo Lee; Elodie Burlet; Floyd Galiano; Magdalena L Circu; Tak Yee Aw; B Jill Williams; Stephan N Witt
Journal:  J Biol Chem       Date:  2011-04-22       Impact factor: 5.157

2.  Organismal complexity, protein complexity, and gene duplicability.

Authors:  Jing Yang; Richard Lusk; Wen-Hsiung Li
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-05       Impact factor: 11.205

Review 3.  Modeling the function of bacterial virulence factors in Saccharomyces cerevisiae.

Authors:  Raphael H Valdivia
Journal:  Eukaryot Cell       Date:  2004-08

4.  Cells have distinct mechanisms to maintain protection against different reactive oxygen species: oxidative-stress-response genes.

Authors:  Geoffrey W Thorpe; Chii S Fong; Nazif Alic; Vincent J Higgins; Ian W Dawes
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-15       Impact factor: 11.205

5.  Bioinformatical assay of human gene morbidity.

Authors:  Fyodor A Kondrashov; Aleksey Y Ogurtsov; Alexey S Kondrashov
Journal:  Nucleic Acids Res       Date:  2004-03-12       Impact factor: 16.971

6.  A Genome-wide CRISPR Death Screen Identifies Genes Essential for Oxidative Phosphorylation.

Authors:  Jason D Arroyo; Alexis A Jourdain; Sarah E Calvo; Carmine A Ballarano; John G Doench; David E Root; Vamsi K Mootha
Journal:  Cell Metab       Date:  2016-09-22       Impact factor: 27.287

7.  MitoP2, an integrated database on mitochondrial proteins in yeast and man.

Authors:  C Andreoli; H Prokisch; K Hörtnagel; J C Mueller; M Münsterkötter; C Scharfe; T Meitinger
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

8.  Plasma membrane localization of Ras requires class C Vps proteins and functional mitochondria in Saccharomyces cerevisiae.

Authors:  Geng Wang; Robert J Deschenes
Journal:  Mol Cell Biol       Date:  2006-04       Impact factor: 4.272

Review 9.  Budding yeast for budding geneticists: a primer on the Saccharomyces cerevisiae model system.

Authors:  Andrea A Duina; Mary E Miller; Jill B Keeney
Journal:  Genetics       Date:  2014-05       Impact factor: 4.562

10.  Mss51p promotes mitochondrial Cox1p synthesis and interacts with newly synthesized Cox1p.

Authors:  Xochitl Perez-Martinez; Sarah A Broadley; Thomas D Fox
Journal:  EMBO J       Date:  2003-11-03       Impact factor: 11.598

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.