Literature DB >> 12120872

A model for actin-filament length distribution in a lamellipod.

L Edelstein-Keshet1, G B Ermentrout.   

Abstract

A mathematical model is derived to describe the distributions of lengths of cytoskeletal actin filaments, along a 1 D transect of the lamellipod (or along the axis of a filopod) in an animal cell. We use the facts that actin filament barbed ends are aligned towards the cell membrane and that these ends grow rapidly in the presence of actin monomer as long as they are uncapped. Once a barbed end is capped, its filament tends to be degraded by fragmentation or depolymerization. Both the growth (by polymerization) and the fragmentation by actin-cutting agents are depicted in the model, which takes into account the dependence of cutting probability on the position along a filament. It is assumed that barbed ends are capped rapidly away from the cell membrane. The model consists of a system of discrete-integro-PDE's that describe the densities of barbed filament ends as a function of spatial position and length of their actin filament "tails". The population of capped barbed ends and their trailing filaments is similarly represented. This formulation allows us to investigate hypotheses about the fragmentation and polymerization of filaments in a caricature of the lamellipod and compare theoretical and observed actin density profiles.

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Year:  2001        PMID: 12120872     DOI: 10.1007/s002850100102

Source DB:  PubMed          Journal:  J Math Biol        ISSN: 0303-6812            Impact factor:   2.259


  15 in total

1.  The effects of filament aging and annealing on a model lamellipodium undergoing disassembly by severing.

Authors:  P J Michalski; A E Carlsson
Journal:  Phys Biol       Date:  2010-05-26       Impact factor: 2.583

2.  Stimulation of actin polymerization by filament severing.

Authors:  A E Carlsson
Journal:  Biophys J       Date:  2005-10-28       Impact factor: 4.033

3.  Growing actin networks form lamellipodium and lamellum by self-assembly.

Authors:  Florian Huber; Josef Käs; Björn Stuhrmann
Journal:  Biophys J       Date:  2008-08-15       Impact factor: 4.033

Review 4.  Mathematics of cell motility: have we got its number?

Authors:  Alex Mogilner
Journal:  J Math Biol       Date:  2008-05-07       Impact factor: 2.259

Review 5.  Multiscale modeling of cell shape from the actin cytoskeleton.

Authors:  Padmini Rangamani; Granville Yuguang Xiong; Ravi Iyengar
Journal:  Prog Mol Biol Transl Sci       Date:  2014       Impact factor: 3.622

6.  Predicted Effects of Severing Enzymes on the Length Distribution and Total Mass of Microtubules.

Authors:  Yin-Wei Kuo; Olivier Trottier; Jonathon Howard
Journal:  Biophys J       Date:  2019-10-25       Impact factor: 4.033

Review 7.  Emergent complexity of the cytoskeleton: from single filaments to tissue.

Authors:  F Huber; J Schnauß; S Rönicke; P Rauch; K Müller; C Fütterer; J Käs
Journal:  Adv Phys       Date:  2013-03-06       Impact factor: 25.375

8.  Cross-scale, cross-pathway evaluation using an agent-based non-small cell lung cancer model.

Authors:  Zhihui Wang; Christina M Birch; Jonathan Sagotsky; Thomas S Deisboeck
Journal:  Bioinformatics       Date:  2009-07-04       Impact factor: 6.937

9.  Stochastic severing of actin filaments by actin depolymerizing factor/cofilin controls the emergence of a steady dynamical regime.

Authors:  Jeremy Roland; Julien Berro; Alphée Michelot; Laurent Blanchoin; Jean-Louis Martiel
Journal:  Biophys J       Date:  2007-12-07       Impact factor: 4.033

10.  Variable stoichiometry of the TatA component of the twin-arginine protein transport system observed by in vivo single-molecule imaging.

Authors:  Mark C Leake; Nicholas P Greene; Rachel M Godun; Thierry Granjon; Grant Buchanan; Shuyun Chen; Richard M Berry; Tracy Palmer; Ben C Berks
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-01       Impact factor: 11.205

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