Literature DB >> 20505229

The effects of filament aging and annealing on a model lamellipodium undergoing disassembly by severing.

P J Michalski1, A E Carlsson.   

Abstract

We use numerical simulations to study the properties of a model lamellipodium as it disassembles by filament severing. The growing lamellipodium is modeled as a 2D or 3D periodic lattice of crosslinked actin filaments. At each time step a new layer of actin filaments is added at the membrane, existing filaments are severed stochastically and disconnected sections of the network are removed. Filament aging is modeled by including several different filament chemical states. Filament annealing is included by allowing existing filaments to grow new filaments. The properties of the model are studied as functions of the number of states and the severing and annealing rates. The network width is proportional to the sum of the average lifetimes of the states, and is well modeled by a simple kinetic theory. The length of the network scales linearly with actin concentration and has a finite width even at high severing protein concentrations. The edge of the growing network becomes sharper as either the number of states or the dimensionality is increased. Annealing increases the average length of the network, and the network length diverges at a critical annealing rate.

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Year:  2010        PMID: 20505229      PMCID: PMC2879090          DOI: 10.1088/1478-3975/7/2/026004

Source DB:  PubMed          Journal:  Phys Biol        ISSN: 1478-3967            Impact factor:   2.583


  35 in total

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Journal:  Biophys J       Date:  1999-12       Impact factor: 4.033

2.  Hydrolysis of ATP by polymerized actin depends on the bound divalent cation but not profilin.

Authors:  Laurent Blanchoin; Thomas D Pollard
Journal:  Biochemistry       Date:  2002-01-15       Impact factor: 3.162

Review 3.  The lamellipodium: where motility begins.

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Journal:  Trends Cell Biol       Date:  2002-03       Impact factor: 20.808

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Journal:  Science       Date:  2002-02-08       Impact factor: 47.728

Review 5.  Mechanism of actin-based motility.

Authors:  D Pantaloni; C Le Clainche; M F Carlier
Journal:  Science       Date:  2001-05-25       Impact factor: 47.728

6.  Regulation of actin dynamics in rapidly moving cells: a quantitative analysis.

Authors:  Alex Mogilner; Leah Edelstein-Keshet
Journal:  Biophys J       Date:  2002-09       Impact factor: 4.033

7.  A model for actin-filament length distribution in a lamellipod.

Authors:  L Edelstein-Keshet; G B Ermentrout
Journal:  J Math Biol       Date:  2001-10       Impact factor: 2.259

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Authors:  Jonathon A Ditlev; Nathaniel M Vacanti; Igor L Novak; Leslie M Loew
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9.  Actin filaments are severed by both native and recombinant dictyostelium cofilin but to different extents.

Authors:  I Ichetovkin; J Han; K M Pang; D A Knecht; J S Condeelis
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Authors:  T D Pollard; L Blanchoin; R D Mullins
Journal:  Annu Rev Biophys Biomol Struct       Date:  2000
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  10 in total

1.  Excitable actin dynamics in lamellipodial protrusion and retraction.

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3.  Distributed actin turnover in the lamellipodium and FRAP kinetics.

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4.  A model actin comet tail disassembling by severing.

Authors:  P J Michalski; A E Carlsson
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5.  Quantitative regulation of the dynamic steady state of actin networks.

Authors:  Angelika Manhart; Téa Aleksandra Icheva; Laurent Blanchoin; Alex Mogilner; Christophe Guerin; Tobbias Klar; Rajaa Boujemaa-Paterski; Manuel Thery
Journal:  Elife       Date:  2019-03-14       Impact factor: 8.140

6.  Modeling cell protrusion predicts how myosin II and actin turnover affect adhesion-based signaling.

Authors:  Ankit Chandra; Mitchell T Butler; James E Bear; Jason M Haugh
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7.  A mechanism with severing near barbed ends and annealing explains structure and dynamics of dendritic actin networks.

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8.  Stoichiometry of Nck-dependent actin polymerization in living cells.

Authors:  Jonathon A Ditlev; Paul J Michalski; Greg Huber; Gonzalo M Rivera; William A Mohler; Leslie M Loew; Bruce J Mayer
Journal:  J Cell Biol       Date:  2012-05-21       Impact factor: 10.539

Review 9.  Cytoskeleton in motion: the dynamics of keratin intermediate filaments in epithelia.

Authors:  Reinhard Windoffer; Michael Beil; Thomas M Magin; Rudolf E Leube
Journal:  J Cell Biol       Date:  2011-09-05       Impact factor: 10.539

10.  Bidirectional coupling between integrin-mediated signaling and actomyosin mechanics explains matrix-dependent intermittency of leading-edge motility.

Authors:  Erik S Welf; Heath E Johnson; Jason M Haugh
Journal:  Mol Biol Cell       Date:  2013-10-23       Impact factor: 4.138

  10 in total

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