Literature DB >> 12051927

The effects of ionic strength on protein stability: the cold shock protein family.

Brian N Dominy1, Dieter Perl, Franz X Schmid, Charles L Brooks.   

Abstract

Continuum electrostatic models are used to examine in detail the mechanism of protein stabilization and destabilization due to salt near physiological concentrations. Three wild-type cold shock proteins taken from mesophilic, thermophilic, and hyperthermophilic bacteria are studied using these methods. The model is validated by comparison with experimental data collected for these proteins. In addition, a number of single point mutants and three designed sequences are examined. The results from this study demonstrate that the sensitivity of protein stability toward salt is correlated with thermostability in the cold shock protein family. The calculations indicate that the mesophile is stabilized by the presence of salt while the thermophile and hyperthermophile are destabilized. A decomposition of the salt influence at a residue level permits identification of regions of the protein sequences that contribute toward the observed salt-dependent stability. This model is used to rationalize the effect of various point mutations with regard to sensitivity toward salt. Finally, it is demonstrated that designed cold shock protein variants exhibit electrostatic properties similar to the natural thermophilic and hyperthermophilic proteins. Copyright 2002 Elsevier Science Ltd.

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Year:  2002        PMID: 12051927     DOI: 10.1016/S0022-2836(02)00259-0

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  45 in total

1.  Electrostatic contributions to the stability of a thermophilic cold shock protein.

Authors:  Huan-Xiang Zhou; Feng Dong
Journal:  Biophys J       Date:  2003-04       Impact factor: 4.033

2.  Toward the physical basis of thermophilic proteins: linking of enriched polar interactions and reduced heat capacity of unfolding.

Authors:  Huan-Xiang Zhou
Journal:  Biophys J       Date:  2002-12       Impact factor: 4.033

3.  Conferring thermostability to mesophilic proteins through optimized electrostatic surfaces.

Authors:  Michael Torrez; Michael Schultehenrich; Dennis R Livesay
Journal:  Biophys J       Date:  2003-11       Impact factor: 4.033

4.  The efficiency of different salts to screen charge interactions in proteins: a Hofmeister effect?

Authors:  Raul Perez-Jimenez; Raquel Godoy-Ruiz; Beatriz Ibarra-Molero; Jose M Sanchez-Ruiz
Journal:  Biophys J       Date:  2004-04       Impact factor: 4.033

5.  Using Correlated Monte Carlo Sampling for Efficiently Solving the Linearized Poisson-Boltzmann Equation Over a Broad Range of Salt Concentration.

Authors:  Marcia O Fenley; Michael Mascagni; James McClain; Alexander R J Silalahi; Nikolai A Simonov
Journal:  J Chem Theory Comput       Date:  2010-01-01       Impact factor: 6.006

6.  Conserved quantitative stability/flexibility relationships (QSFR) in an orthologous RNase H pair.

Authors:  Dennis R Livesay; Donald J Jacobs
Journal:  Proteins       Date:  2006-01-01

7.  Similarity and difference in the unfolding of thermophilic and mesophilic cold shock proteins studied by molecular dynamics simulations.

Authors:  Xiaoqin Huang; Huan-Xiang Zhou
Journal:  Biophys J       Date:  2006-07-14       Impact factor: 4.033

8.  Poisson-Boltzmann calculations of nonspecific salt effects on protein-protein binding free energies.

Authors:  Claudia Bertonati; Barry Honig; Emil Alexov
Journal:  Biophys J       Date:  2007-01-05       Impact factor: 4.033

9.  Robust cross-links in molluscan adhesive gels: testing for contributions from hydrophobic and electrostatic interactions.

Authors:  A M Smith; T M Robinson; M D Salt; K S Hamilton; B E Silvia; R Blasiak
Journal:  Comp Biochem Physiol B Biochem Mol Biol       Date:  2008-10-15       Impact factor: 2.231

10.  Insights into different dependence of dNTP triphosphohydrolase on metal ion species from intracellular ion concentrations in Thermus thermophilus.

Authors:  Naoyuki Kondo; Takashi Nishikubo; Taisuke Wakamatsu; Hirohito Ishikawa; Noriko Nakagawa; Seiki Kuramitsu; Ryoji Masui
Journal:  Extremophiles       Date:  2007-11-08       Impact factor: 2.395

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