Literature DB >> 12034837

Evidence that DNase I hypersensitive site 5 of the human beta-globin locus control region functions as a chromosomal insulator in transgenic mice.

Qiliang Li1, Miaohua Zhang, Hemei Han, Alex Rohde, George Stamatoyannopoulos.   

Abstract

We have previously reported that DNase I hypersensitive site 5 (5'HS5) of the human beta-globin locus control region functions as a chromatin insulator in stable transfection assays. In this report we show that a 3.2 kb DNA fragment containing the entire 5'HS5 region can protect a position-sensitive (A)gamma-globin gene against position effects in transgenic mice. Bracketing is required for function of 5'HS5 as an insulator. The 5'HS5 insulator operates in adult as well as in embryonic murine erythroid cells. The insulator has no significant stimulatory effects of its own. These results indicate that 5'HS5 can function as a chromatin insulator in vivo.

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Year:  2002        PMID: 12034837      PMCID: PMC117184          DOI: 10.1093/nar/30.11.2484

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  28 in total

Review 1.  Putting boundaries on silence.

Authors:  F L Sun; S C Elgin
Journal:  Cell       Date:  1999-11-24       Impact factor: 41.582

Review 2.  Insulators and boundaries: versatile regulatory elements in the eukaryotic genome.

Authors:  A C Bell; A G West; G Felsenfeld
Journal:  Science       Date:  2001-01-19       Impact factor: 47.728

3.  A deletion of the human beta-globin locus activation region causes a major alteration in chromatin structure and replication across the entire beta-globin locus.

Authors:  W C Forrester; E Epner; M C Driscoll; T Enver; M Brice; T Papayannopoulou; M Groudine
Journal:  Genes Dev       Date:  1990-10       Impact factor: 11.361

4.  A position-effect assay for boundaries of higher order chromosomal domains.

Authors:  R Kellum; P Schedl
Journal:  Cell       Date:  1991-03-08       Impact factor: 41.582

5.  Molecular analysis of the human beta-globin locus activation region.

Authors:  W C Forrester; U Novak; R Gelinas; M Groudine
Journal:  Proc Natl Acad Sci U S A       Date:  1989-07       Impact factor: 11.205

6.  Structural analysis and mapping of DNase I hypersensitivity of HS5 of the beta-globin locus control region.

Authors:  Q Li; M Zhang; Z Duan; G Stamatoyannopoulos
Journal:  Genomics       Date:  1999-10-15       Impact factor: 5.736

7.  Conserved CTCF insulator elements flank the mouse and human beta-globin loci.

Authors:  Catherine M Farrell; Adam G West; Gary Felsenfeld
Journal:  Mol Cell Biol       Date:  2002-06       Impact factor: 4.272

8.  Activation of beta-major globin gene transcription is associated with recruitment of NF-E2 to the beta-globin LCR and gene promoter.

Authors:  T Sawado; K Igarashi; M Groudine
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-21       Impact factor: 11.205

9.  A large upstream region is not necessary for gene expression or hypersensitive site formation at the mouse beta -globin locus.

Authors:  C M Farrell; A Grinberg; S P Huang; D Chen; J G Pichel; H Westphal; G Felsenfeld
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-19       Impact factor: 11.205

10.  Human gamma-globin genes silenced independently of other genes in the beta-globin locus.

Authors:  N Dillon; F Grosveld
Journal:  Nature       Date:  1991-03-21       Impact factor: 49.962

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  14 in total

Review 1.  Locus control regions.

Authors:  Qiliang Li; Kenneth R Peterson; Xiangdong Fang; George Stamatoyannopoulos
Journal:  Blood       Date:  2002-11-01       Impact factor: 22.113

2.  A complex chromatin landscape revealed by patterns of nuclease sensitivity and histone modification within the mouse beta-globin locus.

Authors:  Michael Bulger; Dirk Schübeler; M A Bender; Joan Hamilton; Catherine M Farrell; Ross C Hardison; Mark Groudine
Journal:  Mol Cell Biol       Date:  2003-08       Impact factor: 4.272

3.  Cre recombinase-regulated Endothelin1 transgenic mouse lines: novel tools for analysis of embryonic and adult disorders.

Authors:  Andre L P Tavares; David E Clouthier
Journal:  Dev Biol       Date:  2015-02-25       Impact factor: 3.582

Review 4.  Control of globin gene expression during development and erythroid differentiation.

Authors:  George Stamatoyannopoulos
Journal:  Exp Hematol       Date:  2005-03       Impact factor: 3.084

5.  Synergistic and additive properties of the beta-globin locus control region (LCR) revealed by 5'HS3 deletion mutations: implication for LCR chromatin architecture.

Authors:  Xiangdong Fang; Jin Sun; Ping Xiang; Man Yu; Patrick A Navas; Kenneth R Peterson; George Stamatoyannopoulos; Qiliang Li
Journal:  Mol Cell Biol       Date:  2005-08       Impact factor: 4.272

6.  Expression of GATA-1 in a non-hematopoietic cell line induces beta-globin locus control region chromatin structure remodeling and an erythroid pattern of gene expression.

Authors:  Michael E Layon; Catherine J Ackley; Rachel J West; Christopher H Lowrey
Journal:  J Mol Biol       Date:  2006-12-06       Impact factor: 5.469

7.  An insulator with barrier-element activity promotes alpha-spectrin gene expression in erythroid cells.

Authors:  Patrick G Gallagher; Douglas G Nilson; Laurie A Steiner; Yelena D Maksimova; Jolinta Y Lin; David M Bodine
Journal:  Blood       Date:  2008-11-13       Impact factor: 22.113

Review 8.  CTCF shapes chromatin by multiple mechanisms: the impact of 20 years of CTCF research on understanding the workings of chromatin.

Authors:  Rolf Ohlsson; Marek Bartkuhn; Rainer Renkawitz
Journal:  Chromosoma       Date:  2010-02-20       Impact factor: 4.316

9.  Combinatorial assembly of developmental stage-specific enhancers controls gene expression programs during human erythropoiesis.

Authors:  Jian Xu; Zhen Shao; Kimberly Glass; Daniel E Bauer; Luca Pinello; Ben Van Handel; Serena Hou; John A Stamatoyannopoulos; Hanna K A Mikkola; Guo-Cheng Yuan; Stuart H Orkin
Journal:  Dev Cell       Date:  2012-10-04       Impact factor: 12.270

10.  HS5 of the human beta-globin locus control region: a developmental stage-specific border in erythroid cells.

Authors:  Albert W K Wai; Nynke Gillemans; Selina Raguz-Bolognesi; Sara Pruzina; Gaetano Zafarana; Dies Meijer; Sjaak Philipsen; Frank Grosveld
Journal:  EMBO J       Date:  2003-09-01       Impact factor: 11.598

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