Literature DB >> 12009919

Folding and conformational consequences of glycine to alanine replacements at different positions in a collagen model peptide.

Manjiri Bhate1, Xin Wang, Jean Baum, Barbara Brodsky.   

Abstract

The collagen model peptide T1-892 includes a C-terminal nucleation domain, (Gly-Pro-Hyp)(4), and an N-terminal (Gly-X-Y)(6) sequence taken from type I collagen. In osteogenesis imperfecta (OI) and other collagen diseases, single base mutations often convert one Gly to a larger residue, and T1-892 homologues modeling such mutations were synthesized with Gly to Ala substitutions in either the (Gly-Pro-Hyp)(4) domain, Gly25Ala, or the (Gly-X-Y)(6) domain, Gly10Ala. CD and NMR studies show the Gly10Ala peptide forms a normal triple-helix at the C-terminal end and propagates from the C- to the N-terminus until the Gly --> Ala substitution is encountered. At this point, triple-helix folding is terminated and cannot be reinitiated, leaving a nonhelical N-terminus. A decreased thermal stability is observed as a result of the shorter length of the triple-helix. In contrast, introduction of the Gly to Ala replacement at position 25, in the nucleation domain, shifts the monomer/trimer equilibrium toward the monomer form. The increased monomer and lower trimer populations are reflected in the dramatic decrease in triple-helix content and stability. Unlike the Ala replacement at position 10, the Ala substitution in the (Gly-Pro-Hyp)(4) region can still be incorporated into a triple-helix, but at a greatly decreased rate of folding, since the original efficient nucleation site is no longer operative. The specific consequences of Gly to Ala replacements in two distinctive sequences in this triple-helical peptide may help clarify the variability in OI clinical severity resulting from mutations at different sites along type I collagen chains.

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Year:  2002        PMID: 12009919     DOI: 10.1021/bi020070d

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  12 in total

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Journal:  J Biol Chem       Date:  2010-11-11       Impact factor: 5.157

2.  Guanine nucleotide exchange factor independence of the G-protein eEF1A through novel mutant forms and biochemical properties.

Authors:  Sedide B Ozturk; Terri Goss Kinzy
Journal:  J Biol Chem       Date:  2008-06-18       Impact factor: 5.157

3.  The Proline/Glycine-Rich Region of the Biofilm Adhesion Protein Aap Forms an Extended Stalk that Resists Compaction.

Authors:  Alexander E Yarawsky; Lance R English; Steven T Whitten; Andrew B Herr
Journal:  J Mol Biol       Date:  2016-11-25       Impact factor: 5.469

4.  Osteogenesis imperfecta model peptides: incorporation of residues replacing Gly within a triple helix achieved by renucleation and local flexibility.

Authors:  Jianxi Xiao; Balaraman Madhan; Yingjie Li; Barbara Brodsky; Jean Baum
Journal:  Biophys J       Date:  2011-07-20       Impact factor: 4.033

Review 5.  Synthesis and biological applications of collagen-model triple-helical peptides.

Authors:  Gregg B Fields
Journal:  Org Biomol Chem       Date:  2010-01-20       Impact factor: 3.876

6.  Mutation spectrum of COL1A1/COL1A2 screening by high-resolution melting analysis of Chinese patients with osteogenesis imperfecta.

Authors:  Mingyan Ju; Xue Bai; Tianke Zhang; Yunshou Lin; Li Yang; Huaiyu Zhou; Xiaoli Chang; Shizhen Guan; Xiuzhi Ren; Keqiu Li; Yi Wang; Guang Li
Journal:  J Bone Miner Metab       Date:  2019-08-14       Impact factor: 2.626

7.  Sequence recombination improves target specificity in a redesigned collagen peptide abc-type heterotrimer.

Authors:  Sumana Giddu; Fei Xu; Vikas Nanda
Journal:  Proteins       Date:  2012-11-05

8.  Dynamic Water-Mediated Hydrogen Bonding in a Collagen Model Peptide.

Authors:  Iwen Fu; David A Case; Jean Baum
Journal:  Biochemistry       Date:  2015-10-06       Impact factor: 3.162

9.  Sequence dependence of kinetics and morphology of collagen model peptide self-assembly into higher order structures.

Authors:  Karunakar Kar; Yuh-Hwa Wang; Barbara Brodsky
Journal:  Protein Sci       Date:  2008-04-25       Impact factor: 6.725

10.  Molecular underpinnings of integrin binding to collagen-mimetic peptides containing vascular Ehlers-Danlos syndrome-associated substitutions.

Authors:  Cody L Hoop; Allysa P Kemraj; Baifan Wang; Sonal Gahlawat; Madison Godesky; Jie Zhu; Haley R Warren; David A Case; David I Shreiber; Jean Baum
Journal:  J Biol Chem       Date:  2019-08-12       Impact factor: 5.157

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