Literature DB >> 11980703

The structure of Saccharomyces cerevisiae Met8p, a bifunctional dehydrogenase and ferrochelatase.

Heidi L Schubert1, Evelyne Raux, Amanda A Brindley, Helen K Leech, Keith S Wilson, Christopher P Hill, Martin J Warren.   

Abstract

Sirohaem is a tetrapyrrole-derived prosthetic group that is required for the essential assimilation of sulfur and nitrogen into all living systems as part of the sulfite and nitrite reductase systems. The final two steps in the biosynthesis of sirohaem involve a beta-NAD(+)-dependent dehydrogenation of precorrin-2 to generate sirohydrochlorin followed by ferrochelation to yield sirohaem. In Saccharomyces cerevisiae, Met8p is a bifunctional enzyme that carries out both of these reactions. Here, we report the 2.2 A resolution crystal structure of Met8p, which adopts a novel fold that bears no resemblance to the previously determined structures of cobalt- or ferro-chelatases. Analysis of mutant proteins suggests that both catalytic activities share a single active site, and that Asp141 plays an essential role in both dehydrogenase and chelatase processes.

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Year:  2002        PMID: 11980703      PMCID: PMC125995          DOI: 10.1093/emboj/21.9.2068

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  28 in total

1.  Structural and mechanistic basis of porphyrin metallation by ferrochelatase.

Authors:  D Lecerof; M Fodje; A Hansson; M Hansson; S Al-Karadaghi
Journal:  J Mol Biol       Date:  2000-03-17       Impact factor: 5.469

2.  Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons.

Authors:  A Nicholls; K A Sharp; B Honig
Journal:  Proteins       Date:  1991

Review 3.  Mechanism and regulation of Mg-chelatase.

Authors:  C J Walker; R D Willows
Journal:  Biochem J       Date:  1997-10-15       Impact factor: 3.857

4.  Fast and sensitive multiple sequence alignments on a microcomputer.

Authors:  D G Higgins; P M Sharp
Journal:  Comput Appl Biosci       Date:  1989-04

5.  The Escherichia coli cysG gene encodes S-adenosylmethionine-dependent uroporphyrinogen III methylase.

Authors:  M J Warren; C A Roessner; P J Santander; A I Scott
Journal:  Biochem J       Date:  1990-02-01       Impact factor: 3.857

6.  A role for Salmonella typhimurium cbiK in cobalamin (vitamin B12) and siroheme biosynthesis.

Authors:  E Raux; C Thermes; P Heathcote; A Rambach; M J Warren
Journal:  J Bacteriol       Date:  1997-05       Impact factor: 3.490

7.  Crystal structure of ferrochelatase: the terminal enzyme in heme biosynthesis.

Authors:  S Al-Karadaghi; M Hansson; S Nikonov; B Jönsson; L Hederstedt
Journal:  Structure       Date:  1997-11-15       Impact factor: 5.006

8.  Automated MAD and MIR structure solution.

Authors:  T C Terwilliger; J Berendzen
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-04

9.  Structural and kinetic evidence for strain in biological catalysis.

Authors:  F E Romesberg; B D Santarsiero; B Spiller; J Yin; D Barnes; P G Schultz; R C Stevens
Journal:  Biochemistry       Date:  1998-10-13       Impact factor: 3.162

10.  Atomic structures of the human immunophilin FKBP-12 complexes with FK506 and rapamycin.

Authors:  G D Van Duyne; R F Standaert; P A Karplus; S L Schreiber; J Clardy
Journal:  J Mol Biol       Date:  1993-01-05       Impact factor: 5.469

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  18 in total

1.  Tetrapyrrole Metabolism in Arabidopsis thaliana.

Authors:  Ryouichi Tanaka; Koichi Kobayashi; Tatsuru Masuda
Journal:  Arabidopsis Book       Date:  2011-07-31

2.  Chelatases: distort to select?

Authors:  Salam Al-Karadaghi; Ricardo Franco; Mats Hansson; John A Shelnutt; Grazia Isaya; Gloria C Ferreira
Journal:  Trends Biochem Sci       Date:  2006-02-15       Impact factor: 13.807

Review 3.  Siroheme: an essential component for life on earth.

Authors:  Baishnab C Tripathy; Irena Sherameti; Ralf Oelmüller
Journal:  Plant Signal Behav       Date:  2010-01

4.  A comprehensive mechanistic model of iron metabolism in Saccharomyces cerevisiae.

Authors:  Paul A Lindahl
Journal:  Metallomics       Date:  2019-09-18       Impact factor: 4.526

5.  Structure and function of SirC from Bacillus megaterium: a metal-binding precorrin-2 dehydrogenase.

Authors:  Heidi L Schubert; Ruth S Rose; Helen K Leech; Amanda A Brindley; Christopher P Hill; Stephen E J Rigby; Martin J Warren
Journal:  Biochem J       Date:  2008-10-15       Impact factor: 3.857

6.  Metal binding to Bacillus subtilis ferrochelatase and interaction between metal sites.

Authors:  David Lecerof; Michel N Fodje; Román Alvarez León; Ulf Olsson; Andreas Hansson; Emma Sigfridsson; Ulf Ryde; Mats Hansson; Salam Al-Karadaghi
Journal:  J Biol Inorg Chem       Date:  2003-01-18       Impact factor: 3.358

7.  Identification of unknown protein function using metabolite cocktail screening.

Authors:  Igor A Shumilin; Marcin Cymborowski; Olga Chertihin; Kula N Jha; John C Herr; Scott A Lesley; Andrzej Joachimiak; Wladek Minor
Journal:  Structure       Date:  2012-08-30       Impact factor: 5.006

8.  A novel pathway for the biosynthesis of heme in Archaea: genome-based bioinformatic predictions and experimental evidence.

Authors:  Sonja Storbeck; Sarah Rolfes; Evelyne Raux-Deery; Martin J Warren; Dieter Jahn; Gunhild Layer
Journal:  Archaea       Date:  2010-12-13       Impact factor: 3.273

Review 9.  Heme biosynthesis and its regulation: towards understanding and improvement of heme biosynthesis in filamentous fungi.

Authors:  Angelique C W Franken; B Christien Lokman; Arthur F J Ram; Peter J Punt; Cees A M J J van den Hondel; Sandra de Weert
Journal:  Appl Microbiol Biotechnol       Date:  2011-06-18       Impact factor: 4.813

10.  Chlorophyll biosynthesis gene evolution indicates photosystem gene duplication, not photosystem merger, at the origin of oxygenic photosynthesis.

Authors:  Filipa L Sousa; Liat Shavit-Grievink; John F Allen; William F Martin
Journal:  Genome Biol Evol       Date:  2013       Impact factor: 3.416

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