Literature DB >> 11880601

Infinite pleated beta -sheet formed by the beta-hairpin Boc-beta-Phe-beta-Phe-D-Pro-Gly-beta-Phe-beta-Phe-OMe.

Isabella Karle1, Hosahudya N Gopi, Padmanabhan Balaram.   

Abstract

A beta-hairpin conformation and extended beta-pleated sheet assembly have been characterized by single crystal x-ray diffraction for the synthetic peptide t-butoxycarbonyl--beta-Phe-beta-Phe-D-Pro-Gly-beta-Phe-beta-Phe-methyl ester [beta-Phe: (S)-beta(3) homophenylalanine]. The centrally located D-Pro-Gly segment nucleates a chain reversal in a type II' beta-turn conformation. Two intramolecular cross-strand hydrogen bonds stabilize the peptide fold. Intermolecular NH...O[double bond]C hydrogen bonds (two on each side of the hairpin) connect the hairpins into an infinitely extended beta-sheet. The beta-residues cause all C[double bond]O groups to point in the same direction, resulting in a "polar" sheet by the unidirectional alignment of NH...O[double bond]C hydrogen bonds. In contrast, beta-sheets formed by alpha-residues have alternating directions for the hydrogen bonds, thus resulting in an "apolar" sheet. The crystallographic parameters for C(53)H(66)N(6)O(9) x CH(3)OH are: space group P2(1), a = 9.854(2) A, b = 10.643(2) A, c = 25.296(4) A, beta = 100.39(2) degrees, Z = 2, agreement factor R(1) = 0.065 for 3,706 data observed >4 sigma(F) and a resolution of 0.90 A.

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Year:  2002        PMID: 11880601      PMCID: PMC122739          DOI: 10.1073/pnas.022616499

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  10 in total

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Authors:  L Pauling; R B Corey
Journal:  Proc Natl Acad Sci U S A       Date:  1953-04       Impact factor: 11.205

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Authors:  C Das; G A Naganagowda; I L Karle; P Balaram
Journal:  Biopolymers       Date:  2001-03       Impact factor: 2.505

5.  Design of a monomeric 23-residue polypeptide with defined tertiary structure.

Authors:  M D Struthers; R P Cheng; B Imperiali
Journal:  Science       Date:  1996-01-19       Impact factor: 47.728

6.  Peptide hybrids containing alpha - and beta-amino acids: structure of a decapeptide beta-hairpin with two facing beta-phenylalanine residues.

Authors:  I L Karle; H N Gopi; P Balaram
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-20       Impact factor: 11.205

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Authors:  I L Karle; S K Awasthi; P Balaram
Journal:  Proc Natl Acad Sci U S A       Date:  1996-08-06       Impact factor: 11.205

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Authors:  S Arnott; S D Dover; A Elliott
Journal:  J Mol Biol       Date:  1967-11-28       Impact factor: 5.469

9.  A designed beta-hairpin peptide.

Authors:  S K Awasthi; S Raghothama; P Balaram
Journal:  Biochem Biophys Res Commun       Date:  1995-11-02       Impact factor: 3.575

10.  De novo protein design: crystallographic characterization of a synthetic peptide containing independent helical and hairpin domains.

Authors:  I L Karle; C Das; P Balaram
Journal:  Proc Natl Acad Sci U S A       Date:  2000-03-28       Impact factor: 11.205

  10 in total
  5 in total

1.  Molecular Design of beta-Hairpin Peptides for Material Construction.

Authors:  Ronak V Rughani; Joel P Schneider
Journal:  MRS Bull       Date:  2008-05       Impact factor: 6.578

2.  Hybrid peptide hairpins containing alpha- and omega-amino acids: conformational analysis of decapeptides with unsubstituted beta-, gamma-, and delta-residues at positions 3 and 8.

Authors:  Rituparna S Roy; Hosahudya N Gopi; Srinivasarao Raghothama; Isabella L Karle; Padmanabhan Balaram
Journal:  Chemistry       Date:  2006-04-12       Impact factor: 5.236

3.  Peptide hairpins with strand segments containing alpha- and beta-amino acid residues: cross-strand aromatic interactions of facing Phe residues.

Authors:  Rituparna S Roy; Hosahudya N Gopi; S Raghothama; Richard D Gilardi; Isabella L Karle; Padmanabhan Balaram
Journal:  Biopolymers       Date:  2005       Impact factor: 2.505

4.  Miniature β-Hairpin Mimetic by Intramolecular Hydrogen Bond and C-H···π Interactions.

Authors:  Sujay Kumar Nandi; Raju Sarkar; Akhilesh Jaiswar; Susmita Roy; Debasish Haldar
Journal:  ACS Omega       Date:  2022-05-11

5.  Alpha,beta hybrid peptides: a polypeptide helix with a central segment containing two consecutive beta-amino acid residues.

Authors:  Rituparna S Roy; Isabella L Karle; S Raghothama; P Balaram
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-16       Impact factor: 11.205

  5 in total

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