Literature DB >> 7488115

A designed beta-hairpin peptide.

S K Awasthi1, S Raghothama, P Balaram.   

Abstract

A synthetic octapeptide, Boc-Leu-Val-Val-D-Pro-Gly-Leu-Val-Val-OMe (1) has been designed as a model for a beta-hairpin conformation. Circular dichroism spectra in various organic solvents reveal a single negative band at 214-217 nm consistent with beta-sheet structures. NMR studies in CDCl3 and C6D6 establish the solvent shielded nature of the Leu(1), Val(3), Leu(6) and Val (8) NH groups. Nuclear Overhauser effects are observed between Val(7) C alpha H and Val(2) C alpha H protons providing strong support for a beta-hairpin conformation. Several important diagnostic interresidue NOEs establish a Type II' beta-turn conformation for the D-Pro-Gly segment and extended conformations for the amino and carboxyl terminal tripeptide arms. The high solubility of the beta-hairpin peptide in organic solvents holds promise for the development of models for three and four stranded beta-sheets.

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Year:  1995        PMID: 7488115     DOI: 10.1006/bbrc.1995.2634

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  11 in total

1.  Infinite pleated beta -sheet formed by the beta-hairpin Boc-beta-Phe-beta-Phe-D-Pro-Gly-beta-Phe-beta-Phe-OMe.

Authors:  Isabella Karle; Hosahudya N Gopi; Padmanabhan Balaram
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-05       Impact factor: 11.205

2.  Peptide hybrids containing alpha - and beta-amino acids: structure of a decapeptide beta-hairpin with two facing beta-phenylalanine residues.

Authors:  I L Karle; H N Gopi; P Balaram
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-20       Impact factor: 11.205

3.  A designed beta-hairpin peptide in crystals.

Authors:  I L Karle; S K Awasthi; P Balaram
Journal:  Proc Natl Acad Sci U S A       Date:  1996-08-06       Impact factor: 11.205

4.  Hybrid peptide hairpins containing alpha- and omega-amino acids: conformational analysis of decapeptides with unsubstituted beta-, gamma-, and delta-residues at positions 3 and 8.

Authors:  Rituparna S Roy; Hosahudya N Gopi; Srinivasarao Raghothama; Isabella L Karle; Padmanabhan Balaram
Journal:  Chemistry       Date:  2006-04-12       Impact factor: 5.236

5.  NMR structural analysis of a peptide mimic of the bridging sheet of HIV-1 gp120 in methanol and water.

Authors:  Kausik Chakraborty; P Shivakumar; S Raghothama; Raghavan Varadarajan
Journal:  Biochem J       Date:  2005-09-01       Impact factor: 3.857

6.  Peptide hairpins with strand segments containing alpha- and beta-amino acid residues: cross-strand aromatic interactions of facing Phe residues.

Authors:  Rituparna S Roy; Hosahudya N Gopi; S Raghothama; Richard D Gilardi; Isabella L Karle; Padmanabhan Balaram
Journal:  Biopolymers       Date:  2005       Impact factor: 2.505

7.  Asymmetric catalysis at a distance: catalytic, site-selective phosphorylation of teicoplanin.

Authors:  Sunkyu Han; Scott J Miller
Journal:  J Am Chem Soc       Date:  2013-08-07       Impact factor: 15.419

8.  Crystal structure of a hydrophobic 19-residue peptide helix containing three centrally located D amino acids.

Authors:  Isabella L Karle; Hosahudya N Gopi; Padmanabhan Balaram
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-14       Impact factor: 11.205

9.  De novo protein design: crystallographic characterization of a synthetic peptide containing independent helical and hairpin domains.

Authors:  I L Karle; C Das; P Balaram
Journal:  Proc Natl Acad Sci U S A       Date:  2000-03-28       Impact factor: 11.205

10.  X-ray crystal structure of teicoplanin A₂-2 bound to a catalytic peptide sequence via the carrier protein strategy.

Authors:  Sunkyu Han; Binh V Le; Holly S Hajare; Richard H G Baxter; Scott J Miller
Journal:  J Org Chem       Date:  2014-09-02       Impact factor: 4.354

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