Literature DB >> 11842189

Human DINB1-encoded DNA polymerase kappa is a promiscuous extender of mispaired primer termini.

M Todd Washington1, Robert E Johnson, Louise Prakash, Satya Prakash.   

Abstract

Both in yeast and humans, DNA polymerase (Pol) (eta) functions in the error-free replication of UV-damaged DNA, and Pol(eta) has the unique ability to efficiently replicate through a cis-syn thymine-thymine (T-T) dimer by inserting two As opposite the two Ts of the dimer. Although human DINB1-encoded Pol(kappa) belongs to the same protein family as Pol(eta), Pol(kappa) shows no ability to bypass this DNA lesion and its biological function has remained unclear. Here, we examine Pol(kappa) for its ability to extend from primer-terminal mispairs opposite nondamaged and damaged DNA templates. We find that Pol(kappa) is a promiscuous extender of primer-terminal mispairs opposite nondamaged DNA templates, and interestingly, it is also very efficient at extending from a G opposite the 3'T of a T-T dimer. These observations provide biochemical evidence for a role of Pol(kappa) in the extension of mismatched base pairs during normal DNA replication, and in addition, they implicate Pol(kappa) in the mutagenic bypass of T-T dimers. In its proficient mismatch extension ability, Pol(kappa) is more similar to the unrelated DNA polymerase zeta than it is to the phylogenetically related Pol(eta) or Pol(iota). Thus, in humans, Pol(kappa) would compete with Pol(zeta) for the extension of mismatched base pairs on damaged and undamaged DNAs.

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Year:  2002        PMID: 11842189      PMCID: PMC122293          DOI: 10.1073/pnas.032594399

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

Review 1.  Sloppier copier DNA polymerases involved in genome repair.

Authors:  M F Goodman; B Tippin
Journal:  Curr Opin Genet Dev       Date:  2000-04       Impact factor: 5.578

2.  Bridging the gap: a family of novel DNA polymerases that replicate faulty DNA.

Authors:  R E Johnson; M T Washington; S Prakash; L Prakash
Journal:  Proc Natl Acad Sci U S A       Date:  1999-10-26       Impact factor: 11.205

3.  Mutation enhancement by DINB1, a mammalian homologue of the Escherichia coli mutagenesis protein dinB.

Authors:  T Ogi; T Kato; T Kato; H Ohmori
Journal:  Genes Cells       Date:  1999-11       Impact factor: 1.891

4.  Roles of E. coli DNA polymerases IV and V in lesion-targeted and untargeted SOS mutagenesis.

Authors:  M Tang; P Pham; X Shen; J S Taylor; M O'Donnell; R Woodgate; M F Goodman
Journal:  Nature       Date:  2000-04-27       Impact factor: 49.962

5.  UmuD'(2)C is an error-prone DNA polymerase, Escherichia coli pol V.

Authors:  M Tang; X Shen; E G Frank; M O'Donnell; R Woodgate; M F Goodman
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-03       Impact factor: 11.205

6.  Fidelity of human DNA polymerase eta.

Authors:  R E Johnson; M T Washington; S Prakash; L Prakash
Journal:  J Biol Chem       Date:  2000-03-17       Impact factor: 5.157

7.  poliota, a remarkably error-prone human DNA polymerase.

Authors:  A Tissier; J P McDonald; E G Frank; R Woodgate
Journal:  Genes Dev       Date:  2000-07-01       Impact factor: 11.361

8.  Fidelity and processivity of Saccharomyces cerevisiae DNA polymerase eta.

Authors:  M T Washington; R E Johnson; S Prakash; L Prakash
Journal:  J Biol Chem       Date:  1999-12-24       Impact factor: 5.157

9.  The human DINB1 gene encodes the DNA polymerase Poltheta.

Authors:  R E Johnson; S Prakash; L Prakash
Journal:  Proc Natl Acad Sci U S A       Date:  2000-04-11       Impact factor: 11.205

10.  Accuracy of thymine-thymine dimer bypass by Saccharomyces cerevisiae DNA polymerase eta.

Authors:  M T Washington; R E Johnson; S Prakash; L Prakash
Journal:  Proc Natl Acad Sci U S A       Date:  2000-03-28       Impact factor: 11.205

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  56 in total

1.  Translesion replication of benzo[a]pyrene and benzo[c]phenanthrene diol epoxide adducts of deoxyadenosine and deoxyguanosine by human DNA polymerase iota.

Authors:  Ekaterina G Frank; Jane M Sayer; Heiko Kroth; Eiji Ohashi; Haruo Ohmori; Donald M Jerina; Roger Woodgate
Journal:  Nucleic Acids Res       Date:  2002-12-01       Impact factor: 16.971

2.  A mechanism for the exclusion of low-fidelity human Y-family DNA polymerases from base excision repair.

Authors:  Lajos Haracska; Louise Prakash; Satya Prakash
Journal:  Genes Dev       Date:  2003-11-15       Impact factor: 11.361

3.  Checkpoint activation regulates mutagenic translesion synthesis.

Authors:  Mihoko Kai; Teresa S-F Wang
Journal:  Genes Dev       Date:  2003-01-01       Impact factor: 11.361

4.  Efficient and error-free replication past a minor-groove DNA adduct by the sequential action of human DNA polymerases iota and kappa.

Authors:  M Todd Washington; Irina G Minko; Robert E Johnson; William T Wolfle; Thomas M Harris; R Stephen Lloyd; Satya Prakash; Louise Prakash
Journal:  Mol Cell Biol       Date:  2004-07       Impact factor: 4.272

5.  Bypass of N²-ethylguanine by human DNA polymerase κ.

Authors:  Matthew G Pence; Patrick Blans; Charles N Zink; James C Fishbein; Fred W Perrino
Journal:  DNA Repair (Amst)       Date:  2010-10-16

6.  Structural basis for error-free replication of oxidatively damaged DNA by yeast DNA polymerase η.

Authors:  Timothy D Silverstein; Rinku Jain; Robert E Johnson; Louise Prakash; Satya Prakash; Aneel K Aggarwal
Journal:  Structure       Date:  2010-11-10       Impact factor: 5.006

7.  Evidence for a Watson-Crick hydrogen bonding requirement in DNA synthesis by human DNA polymerase kappa.

Authors:  William T Wolfle; M Todd Washington; Eric T Kool; Thomas E Spratt; Sandra A Helquist; Louise Prakash; Satya Prakash
Journal:  Mol Cell Biol       Date:  2005-08       Impact factor: 4.272

8.  What a difference a decade makes: insights into translesion DNA synthesis.

Authors:  Wei Yang; Roger Woodgate
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-26       Impact factor: 11.205

9.  Role of DNA damage-induced replication checkpoint in promoting lesion bypass by translesion synthesis in yeast.

Authors:  Vincent Pagès; Sergio R Santa Maria; Louise Prakash; Satya Prakash
Journal:  Genes Dev       Date:  2009-06-15       Impact factor: 11.361

10.  Mouse Rev1 protein interacts with multiple DNA polymerases involved in translesion DNA synthesis.

Authors:  Caixia Guo; Paula L Fischhaber; Margaret J Luk-Paszyc; Yuji Masuda; Jing Zhou; Kenji Kamiya; Caroline Kisker; Errol C Friedberg
Journal:  EMBO J       Date:  2003-12-15       Impact factor: 11.598

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