Literature DB >> 11779498

Generation and interconversion of multiple distinct nucleosomal states as a mechanism for catalyzing chromatin fluidity.

G J Narlikar1, M L Phelan, R E Kingston.   

Abstract

We have dissected the steps in nucleosome remodeling by BRG1, the ATPase subunit of human SWI/SNF. BRG1-catalyzed DNA exposure is not enhanced by the proximity of the site to the ends of nucleosomal DNA, suggesting that the mechanism involves more than peeling or sliding of the DNA. Comparison of DNA exposure at specific sites with overall changes in the path of DNA implies that BRG1 generates multiple distinct remodeled structures and continuously interconverts them. These characteristics are shared by the entire SWI/SNF complex and have parallels, as well as interesting differences, with the activities of GroEL and Hsp70 protein chaperones. The chaperone-like activity of SWI/SNF is expected to create multiple opportunities for the binding of distinct regulatory factors, providing one mechanism by which SWI/SNF family complexes can contribute to both activation and repression of transcription.

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Year:  2001        PMID: 11779498     DOI: 10.1016/s1097-2765(01)00412-9

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  60 in total

1.  Nucleosome remodeling by the human SWI/SNF complex requires transient global disruption of histone-DNA interactions.

Authors:  Sayura Aoyagi; Geeta Narlikar; Chunyang Zheng; Saïd Sif; Robert E Kingston; Jeffrey J Hayes
Journal:  Mol Cell Biol       Date:  2002-06       Impact factor: 4.272

Review 2.  Chromatin remodeling enzymes: taming the machines. Third in review series on chromatin dynamics.

Authors:  Craig L Peterson
Journal:  EMBO Rep       Date:  2002-04       Impact factor: 8.807

3.  SWI/SNF-dependent chromatin remodeling of RNR3 requires TAF(II)s and the general transcription machinery.

Authors:  Vishva Mitra Sharma; Bing Li; Joseph C Reese
Journal:  Genes Dev       Date:  2003-02-15       Impact factor: 11.361

4.  Transcriptional stimulation by the DNA binding protein Hap46/BAG-1M involves hsp70/hsc70 molecular chaperones.

Authors:  Yilmaz Niyaz; Irina Frenz; Gabriele Petersen; Ulrich Gehring
Journal:  Nucleic Acids Res       Date:  2003-04-15       Impact factor: 16.971

5.  hSWI/SNF-catalyzed nucleosome sliding does not occur solely via a twist-diffusion mechanism.

Authors:  Sayura Aoyagi; Jeffrey J Hayes
Journal:  Mol Cell Biol       Date:  2002-11       Impact factor: 4.272

6.  Dynamic properties of nucleosomes during thermal and ATP-driven mobilization.

Authors:  Andrew Flaus; Tom Owen-Hughes
Journal:  Mol Cell Biol       Date:  2003-11       Impact factor: 4.272

7.  Chromatin remodeling by RSC involves ATP-dependent DNA translocation.

Authors:  Anjanabha Saha; Jacqueline Wittmeyer; Bradley R Cairns
Journal:  Genes Dev       Date:  2002-08-15       Impact factor: 11.361

Review 8.  Nucleosome sliding: facts and fiction.

Authors:  Peter B Becker
Journal:  EMBO J       Date:  2002-09-16       Impact factor: 11.598

9.  The core of the polycomb repressive complex is compositionally and functionally conserved in flies and humans.

Authors:  Stuart S Levine; Alona Weiss; Hediye Erdjument-Bromage; Zhaohui Shao; Paul Tempst; Robert E Kingston
Journal:  Mol Cell Biol       Date:  2002-09       Impact factor: 4.272

10.  Solution AFM studies of human Swi-Snf and its interactions with MMTV DNA and chromatin.

Authors:  H Wang; R Bash; S M Lindsay; D Lohr
Journal:  Biophys J       Date:  2005-08-12       Impact factor: 4.033

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