Literature DB >> 3756147

Alternative carbon monoxide binding modes for horseradish peroxidase studied by resonance Raman spectroscopy.

R Evangelista-Kirkup, G Smulevich, T G Spiro.   

Abstract

Resonance Raman (RR) spectroscopy and infrared spectroscopy have been used to characterize the three vibrational modes, CO and FeC stretching and FeCO bending, for carbon monoxide bound to reduced horseradish peroxidase, with the aid of 13CO and C18O isotope shifts. At high pH, one species, I, is observed, with nu FeC = 490 cm-1 and nu CO = 1932 cm-1. The absence of a band attributable to delta FeCO suggests a linear FeCO unit normal to the heme plane. The data were consistent with I having a strongly H-bonded proximal histidine, as shown by a comparison with imidazole and imidazolate adducts of FeIIPPDME(CO) (PPDME = protoporphyrin IX dimethyl ester), with nu FeC = 497 and 492 cm-1 and nu CO = 1960 and 1942 cm-1. At low pH an additional species, II, is observed, with nu FeC = 537 cm-1, nu CO = 1904 cm-1, and delta FeCO = 587 cm-1; it is attributed to FeCO that is H bonded to a protonated distal histidine, the H bond strongly lowering nu CO and raising nu FeC. The appearance of delta FeCO in the RR spectrum suggests that the FeCO unit in II is tilted with respect to the heme plane. At low pH, the population of I and II depends on the CO concentration. I dominates at low CO/protein levels but is replaced by II as the amount of CO is increased. This behavior is suggested to arise from secondary binding of CO, which induces a conformation change involving the distal residues of the heme pocket.

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Year:  1986        PMID: 3756147     DOI: 10.1021/bi00363a037

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  11 in total

1.  Influence of static and dynamic disorder on the visible and infrared absorption spectra of carbonmonoxy horseradish peroxidase.

Authors:  A D Kaposi; J M Vanderkooi; W W Wright; J Fidy; S S Stavrov
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

2.  Infrared absorption study of the heme pocket dynamics of carbonmonoxyheme proteins.

Authors:  Andras D Kaposi; Jane M Vanderkooi; Solomon S Stavrov
Journal:  Biophys J       Date:  2006-09-15       Impact factor: 4.033

3.  Adventures in bioinorganic chemistry.

Authors:  Thomas G Spiro
Journal:  Inorg Chem       Date:  2007-11-14       Impact factor: 5.165

4.  Density functional theory study of interactions between carbon monoxide and iron tetraaza macrocyclic complexes, FeTXTAA (X = -Cl, -OH, -OCH3, -NH2, and -NO2).

Authors:  Isaias de Matos Mourão Neto; Adilson Luís Pereira Silva; Auro Atsushi Tanaka; Jaldyr de Jesus Gomes Varela
Journal:  J Mol Model       Date:  2017-02-09       Impact factor: 1.810

5.  Haem-linked interactions in horseradish peroxidase revealed by spectroscopic analysis of the Phe-221-->Met mutant.

Authors:  B D Howes; N C Veitch; A T Smith; C G White; G Smulevich
Journal:  Biochem J       Date:  2001-01-15       Impact factor: 3.857

6.  Spectroscopic characterization of mutations at the Phe41 position in the distal haem pocket of horseradish peroxidase C: structural and functional consequences.

Authors:  Hendrik A Heering; Andrew T Smith; Giulietta Smulevich
Journal:  Biochem J       Date:  2002-05-01       Impact factor: 3.857

7.  Effects of crystallization on the heme-carbon monoxide moiety of bovine heart cytochrome c oxidase carbonyl.

Authors:  M Tsubaki; K Shinzawa; S Yoshikawa
Journal:  Biophys J       Date:  1992-12       Impact factor: 4.033

8.  CO, NO and O2 as Vibrational Probes of Heme Protein Interactions.

Authors:  Thomas G Spiro; Alexandra V Soldatova; Gurusamy Balakrishnan
Journal:  Coord Chem Rev       Date:  2012-06-06       Impact factor: 22.315

9.  DFT analysis of axial and equatorial effects on heme-CO vibrational modes: applications to CooA and H-NOX heme sensor proteins.

Authors:  Changliang Xu; Mohammed Ibrahim; Thomas G Spiro
Journal:  Biochemistry       Date:  2008-01-25       Impact factor: 3.162

10.  Resonance Raman studies of sterically hindered cyanomet "strapped" hemes. Effects of ligand distortion and base tension on iron-carbon bond.

Authors:  T Tanaka; N T Yu; C K Chang
Journal:  Biophys J       Date:  1987-11       Impact factor: 4.033

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