Literature DB >> 11720287

Cellular mutants define a common mRNA degradation pathway targeting cytokine AU-rich elements.

G Stoecklin1, P Stoeckle, M Lu, O Muehlemann, C Moroni.   

Abstract

To functionally classify AU-rich elements (AREs) from six different cytokine mRNAs, we made use of two previously described HT1080-derived cellular mutants (slowA, slowC) that lack a function required for the rapid degradation of interleukin-3 (IL-3) mRNA. Here we show that the defect is specific for ARE-containing mRNAs, whereas nonsense-mediated decay is intact. Degradation of beta-globin reporter transcripts mediated by the AREs of IL-3, GM-CSF, and TNFalpha, as well as by the structurally different and less potent AREs of IL-2 and IL-6, is impaired in both mutants. All these reporter transcripts are also sensitive to decay induced by ectopic expression of the RNA-binding protein tristetraprolin in the slowC background. Thus, we concluded that the mutants slowA and slowC define a common mRNA degradation pathway that targets cytokine AREs. In NIH3T3 cells, this decay pathway becomes incapacitated by upstream signaling from p38 MAP- or PI3-kinases, which independently stabilize cytokine ARE-containing transcripts. In contrast, c-fos ARE-directed mRNA degradation proceeds through a different pathway not affected by these kinases.

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Year:  2001        PMID: 11720287      PMCID: PMC1370200     

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  52 in total

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Journal:  Nat Rev Mol Cell Biol       Date:  2001-04       Impact factor: 94.444

2.  Regulation of cyclooxygenase 2 mRNA stability by the mitogen-activated protein kinase p38 signaling cascade.

Authors:  M Lasa; K R Mahtani; A Finch; G Brewer; J Saklatvala; A R Clark
Journal:  Mol Cell Biol       Date:  2000-06       Impact factor: 4.272

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Journal:  Cell       Date:  1988-12-23       Impact factor: 41.582

4.  Cloning of tetradecanoyl phorbol ester-induced 'primary response' sequences and their expression in density-arrested Swiss 3T3 cells and a TPA non-proliferative variant.

Authors:  R W Lim; B C Varnum; H R Herschman
Journal:  Oncogene       Date:  1987       Impact factor: 9.867

5.  The c-fos transcript is targeted for rapid decay by two distinct mRNA degradation pathways.

Authors:  A B Shyu; M E Greenberg; J G Belasco
Journal:  Genes Dev       Date:  1989-01       Impact factor: 11.361

6.  A conserved AU sequence from the 3' untranslated region of GM-CSF mRNA mediates selective mRNA degradation.

Authors:  G Shaw; R Kamen
Journal:  Cell       Date:  1986-08-29       Impact factor: 41.582

7.  Removal of poly(A) and consequent degradation of c-fos mRNA facilitated by 3' AU-rich sequences.

Authors:  T Wilson; R Treisman
Journal:  Nature       Date:  1988-11-24       Impact factor: 49.962

8.  Rapid cytoplasmic turnover of c-myc mRNA: requirement of the 3' untranslated sequences.

Authors:  T R Jones; M D Cole
Journal:  Mol Cell Biol       Date:  1987-12       Impact factor: 4.272

9.  Identification of a common nucleotide sequence in the 3'-untranslated region of mRNA molecules specifying inflammatory mediators.

Authors:  D Caput; B Beutler; K Hartog; R Thayer; S Brown-Shimer; A Cerami
Journal:  Proc Natl Acad Sci U S A       Date:  1986-03       Impact factor: 11.205

10.  Aberrant c-myc RNAs of Burkitt's lymphoma cells have longer half-lives.

Authors:  D Eick; M Piechaczyk; B Henglein; J M Blanchard; B Traub; E Kofler; S Wiest; G M Lenoir; G W Bornkamm
Journal:  EMBO J       Date:  1985-12-30       Impact factor: 11.598

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  48 in total

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2.  Roles of AUF1 isoforms, HuR and BRF1 in ARE-dependent mRNA turnover studied by RNA interference.

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Review 3.  Inflammation: cytokines and RNA-based regulation.

Authors:  Deborah J Stumpo; Wi S Lai; Perry J Blackshear
Journal:  Wiley Interdiscip Rev RNA       Date:  2010-05-06       Impact factor: 9.957

4.  Nonsense-associated alternative splicing of T-cell receptor beta genes: no evidence for frame dependence.

Authors:  Fabio Mohn; Marc Bühler; Oliver Mühlemann
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Review 5.  Translating the Untranslated Region.

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Review 6.  The potential of p38 MAPK inhibitors to modulate periodontal infections.

Authors:  Keith L Kirkwood; Carlos Rossa
Journal:  Curr Drug Metab       Date:  2009-01       Impact factor: 3.731

7.  A GFP-based assay for rapid screening of compounds affecting ARE-dependent mRNA turnover.

Authors:  Don Benjamin; Marco Colombi; Christoph Moroni
Journal:  Nucleic Acids Res       Date:  2004-06-24       Impact factor: 16.971

8.  A constitutive decay element promotes tumor necrosis factor alpha mRNA degradation via an AU-rich element-independent pathway.

Authors:  Georg Stoecklin; Min Lu; Bernd Rattenbacher; Christoph Moroni
Journal:  Mol Cell Biol       Date:  2003-05       Impact factor: 4.272

Review 9.  TIS11 family proteins and their roles in posttranscriptional gene regulation.

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Journal:  J Biomed Biotechnol       Date:  2009-08-06

Review 10.  Post-transcriptional control during chronic inflammation and cancer: a focus on AU-rich elements.

Authors:  Khalid S A Khabar
Journal:  Cell Mol Life Sci       Date:  2010-05-22       Impact factor: 9.261

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