Literature DB >> 10200253

Rings and filaments of beta protein from bacteriophage lambda suggest a superfamily of recombination proteins.

S I Passy1, X Yu, Z Li, C M Radding, E H Egelman.   

Abstract

The beta protein of bacteriophage lambda acts in homologous genetic recombination by catalyzing the annealing of complementary single-stranded DNA produced by the lambda exonuclease. It has been shown that the beta protein binds to the products of the annealing reaction more tightly than to the initial substrates. We find that beta protein exists in three structural states. In the absence of DNA, beta protein forms inactive rings with approximately 12 subunits. The active form of the beta protein in the presence of oligonucleotides or single-stranded DNA is a ring, composed of approximately 15-18 subunits. The double-stranded products of the annealing reaction catalyzed by the rings are bound by beta protein in a left-handed helical structure, which protects the products from nucleolytic degradation. These observations suggest structural homology for a family of proteins, including the phage P22 erf, the bacterial RecT, and the eukaryotic Rad52 proteins, all of which are involved in homologous recombination.

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Year:  1999        PMID: 10200253      PMCID: PMC16323          DOI: 10.1073/pnas.96.8.4279

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  In phage lambda, cos is a recombinator in the red pathway.

Authors:  F W Stahl; I Kobayashi; M M Stahl
Journal:  J Mol Biol       Date:  1985-01-20       Impact factor: 5.469

2.  An algorithm for straightening images of curved filamentous structures.

Authors:  E H Egelman
Journal:  Ultramicroscopy       Date:  1986       Impact factor: 2.689

Review 3.  Formation, translocation and resolution of Holliday junctions during homologous genetic recombination.

Authors:  S C West
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1995-01-30       Impact factor: 6.237

4.  Structural polymorphism of bacterial adhesion pili.

Authors:  E Bullitt; L Makowski
Journal:  Nature       Date:  1995-01-12       Impact factor: 49.962

5.  Lambda red-dependent growth and recombination of phage P22.

Authors:  A R Poteete; A C Fenton
Journal:  Virology       Date:  1984-04-15       Impact factor: 3.616

6.  Nucleotide sequence of bacteriophage lambda DNA.

Authors:  F Sanger; A R Coulson; G F Hong; D F Hill; G B Petersen
Journal:  J Mol Biol       Date:  1982-12-25       Impact factor: 5.469

7.  Beta protein of bacteriophage lambda promotes renaturation of DNA.

Authors:  E Kmiec; W K Holloman
Journal:  J Biol Chem       Date:  1981-12-25       Impact factor: 5.157

8.  Domain structure and quaternary organization of the bacteriophage P22 Erf protein.

Authors:  A R Poteete; R T Sauer; R W Hendrix
Journal:  J Mol Biol       Date:  1983-12-25       Impact factor: 5.469

9.  DNA-binding properties of the Erf protein of bacteriophage P22.

Authors:  A R Poteete; A C Fenton
Journal:  J Mol Biol       Date:  1983-01-15       Impact factor: 5.469

10.  The homologous recombination system of phage lambda. Pairing activities of beta protein.

Authors:  K Muniyappa; C M Radding
Journal:  J Biol Chem       Date:  1986-06-05       Impact factor: 5.157

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  52 in total

1.  RecE/RecT and Redalpha/Redbeta initiate double-stranded break repair by specifically interacting with their respective partners.

Authors:  J P Muyrers; Y Zhang; F Buchholz; A F Stewart
Journal:  Genes Dev       Date:  2000-08-01       Impact factor: 11.361

2.  RadA protein from Archaeoglobus fulgidus forms rings, nucleoprotein filaments and catalyses homologous recombination.

Authors:  M J McIlwraith; D R Hall; A Z Stasiak; A Stasiak; D B Wigley; S C West
Journal:  Nucleic Acids Res       Date:  2001-11-15       Impact factor: 16.971

3.  Creating a dynamic picture of the sliding clamp during T4 DNA polymerase holoenzyme assembly by using fluorescence resonance energy transfer.

Authors:  M A Trakselis; S C Alley; E Abel-Santos; S J Benkovic
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

4.  Visualization of recombination intermediates produced by RAD52-mediated single-strand annealing.

Authors:  E Van Dyck; A Z Stasiak; A Stasiak; S C West
Journal:  EMBO Rep       Date:  2001-09-24       Impact factor: 8.807

5.  High efficiency mutagenesis, repair, and engineering of chromosomal DNA using single-stranded oligonucleotides.

Authors:  H M Ellis; D Yu; T DiTizio; D L Court
Journal:  Proc Natl Acad Sci U S A       Date:  2001-05-29       Impact factor: 11.205

6.  Aberrant double-strand break repair in rad51 mutants of Saccharomyces cerevisiae.

Authors:  L E Kang; L S Symington
Journal:  Mol Cell Biol       Date:  2000-12       Impact factor: 4.272

7.  In vivo assembly and disassembly of Rad51 and Rad52 complexes during double-strand break repair.

Authors:  Toshiko Miyazaki; Debra A Bressan; Miki Shinohara; James E Haber; Akira Shinohara
Journal:  EMBO J       Date:  2004-02-05       Impact factor: 11.598

8.  Hallmarks of homology recognition by RecA-like recombinases are exhibited by the unrelated Escherichia coli RecT protein.

Authors:  Philippe Noirot; Ravindra C Gupta; Charles M Radding; Richard D Kolodner
Journal:  EMBO J       Date:  2003-01-15       Impact factor: 11.598

9.  Mgm101 is a Rad52-related protein required for mitochondrial DNA recombination.

Authors:  MacMillan Mbantenkhu; Xiaowen Wang; Jonathan D Nardozzi; Stephan Wilkens; Elizabeth Hoffman; Anamika Patel; Michael S Cosgrove; Xin Jie Chen
Journal:  J Biol Chem       Date:  2011-10-25       Impact factor: 5.157

10.  Domain structure and DNA binding regions of beta protein from bacteriophage lambda.

Authors:  Zengru Wu; Xu Xing; Casey E Bohl; James W Wisler; James T Dalton; Charles E Bell
Journal:  J Biol Chem       Date:  2006-07-03       Impact factor: 5.157

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