Literature DB >> 117114

A new estimate of sequence divergence of mitochondrial DNA using restriction endonuclease mappings.

N Kaplan, C H Langley.   

Abstract

A new estimate of the sequence divergence of mitochondrial DNA in related species using restriction enzyme maps is constructed. The estimate is derived assuming a simple Posisson-like model for the evolutionary process and is chosen to maximize an expression which is a reasonable approximation to the true likelihood of the restriction map data. Using this estimate, four sets of mitochondrial DNA data are analyzed and discussed.

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Year:  1979        PMID: 117114     DOI: 10.1007/bf01731370

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  11 in total

1.  THE NUMBER OF ALLELES THAT CAN BE MAINTAINED IN A FINITE POPULATION.

Authors:  M KIMURA; J F CROW
Journal:  Genetics       Date:  1964-04       Impact factor: 4.562

2.  Estimation of DNA sequence divergence from comparison of restriction endonuclease digests.

Authors:  W B Upholt
Journal:  Nucleic Acids Res       Date:  1977       Impact factor: 16.971

3.  Mapping of mitochondrial DNA of individual sheep and goats: rapid evolution in the D loop region.

Authors:  W B Upholt; I B Dawid
Journal:  Cell       Date:  1977-07       Impact factor: 41.582

4.  Isolation and genetic localization of three phi-X174 promoter regions.

Authors:  C Y Chen; C A Hutchison; M H Edgell
Journal:  Nat New Biol       Date:  1973-06-20

5.  An examination of the constancy of the rate of molecular evolution.

Authors:  C H Langley; W M Fitch
Journal:  J Mol Evol       Date:  1974       Impact factor: 2.395

6.  A cleavage map of bacteriophage phiX174 genome.

Authors:  A S Lee; R L Sinsheimer
Journal:  Proc Natl Acad Sci U S A       Date:  1974-07       Impact factor: 11.205

Review 7.  The significance of the structural and functional similarities of bacteria and mitochondria.

Authors:  S Nass
Journal:  Int Rev Cytol       Date:  1969

8.  The sampling theory of selectively neutral alleles.

Authors:  W J Ewens
Journal:  Theor Popul Biol       Date:  1972-03       Impact factor: 1.570

Review 9.  Construction of phylogenetic trees.

Authors:  W M Fitch; E Margoliash
Journal:  Science       Date:  1967-01-20       Impact factor: 47.728

10.  Restriction endonuclease cleavage maps of rat and mouse mitochondrial DNAs.

Authors:  R C Parker; R M Watson
Journal:  Nucleic Acids Res       Date:  1977       Impact factor: 16.971

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  15 in total

1.  Variation at the 87A heat shock locus in Drosophila melanogaster.

Authors:  A J Brown
Journal:  Proc Natl Acad Sci U S A       Date:  1983-09       Impact factor: 11.205

2.  A simple method for estimating average number of nucleotide substitutions within and between populations from restriction data.

Authors:  M Nei; J C Miller
Journal:  Genetics       Date:  1990-08       Impact factor: 4.562

3.  Evolutionary change of restriction sites under unequal rates of nucleotide substitution among the three positions of codons.

Authors:  W H Li
Journal:  J Mol Evol       Date:  1986       Impact factor: 2.395

4.  Estimating evolutionary distance from restriction maps of mitochondrial DNA with arbitrary G+C content.

Authors:  K Aoki; Y Tateno; N Takahata
Journal:  J Mol Evol       Date:  1981       Impact factor: 2.395

5.  DNA polymorphism detectable by restriction endonucleases.

Authors:  M Nei; F Tajima
Journal:  Genetics       Date:  1981-01       Impact factor: 4.562

6.  An improved method for estimating sequence divergence of DNA using restriction endonuclease mappings.

Authors:  N Kaplan; K Risko
Journal:  J Mol Evol       Date:  1981       Impact factor: 2.395

7.  The use of restriction endonucleases to measure mitochondrial DNA sequence relatedness in natural populations. III. Techniques and potential applications.

Authors:  R A Lansman; R O Shade; J F Shapira; J C Avise
Journal:  J Mol Evol       Date:  1981       Impact factor: 2.395

8.  Estimation of phylogenetic relationships from DNA restriction patterns and selection of endonuclease cleavage sites.

Authors:  J Adams; E D Rothman
Journal:  Proc Natl Acad Sci U S A       Date:  1982-06       Impact factor: 11.205

9.  Maximum likelihood estimation of the number of nucleotide substitutions from restriction sites data.

Authors:  M Nei; F Tajima
Journal:  Genetics       Date:  1983-09       Impact factor: 4.562

10.  Restriction map variation in the Adh region of Drosophila.

Authors:  C H Langley; E Montgomery; W F Quattlebaum
Journal:  Proc Natl Acad Sci U S A       Date:  1982-09       Impact factor: 11.205

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