Literature DB >> 6267309

An improved method for estimating sequence divergence of DNA using restriction endonuclease mappings.

N Kaplan, K Risko.   

Abstract

The method proposed by Kaplan and Langley for estimating the extent of sequence divergence between related DNA's using restriction endonuclease maps is modified so that the estimates are easier to compute. In the two-species case, these modifications lead via a maximum likelihood approach to an estimate which is closely related to one recently suggested by Nei and Li (1979) and Gotoh et al. (1979). Simulation studies show that the modified estimates are comparable to those of Kaplan and Langley, providing that there is sufficient homology in the DNA segments of the related species. The M-species case, M greater than or equal to 3, is also discussed.

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Year:  1981        PMID： 6267309     DOI： 10.1007/bf01733909

Source DB:  PubMed          Journal:  J Mol Evol        ISSN： 0022-2844            Impact factor:   2.395


  13 in total

1.  A new estimate of sequence divergence of mitochondrial DNA using restriction endonuclease mappings.

Authors:  N Kaplan; C H Langley
Journal:  J Mol Evol       Date:  1979-11       Impact factor: 2.395

2.  Rapid evolution of animal mitochondrial DNA.

Authors:  W M Brown; M George; A C Wilson
Journal:  Proc Natl Acad Sci U S A       Date:  1979-04       Impact factor: 11.205

3.  Theoretical foundations for a quantitative approach to paleogenetics : Part II: Proteins.

Authors:  R Holmquist
Journal:  J Mol Evol       Date:  1972-06       Impact factor: 2.395

4.  An improved method for estimating sequence divergence between related DNAs from changes in restriction endonuclease cleavage sites.

Authors:  O Gotoh; J I Hayashi; H Yonekawa; Y Tagashira
Journal:  J Mol Evol       Date:  1979-12       Impact factor: 2.395

5.  Estimation of DNA sequence divergence from comparison of restriction endonuclease digests.

Authors:  W B Upholt
Journal:  Nucleic Acids Res       Date:  1977       Impact factor: 16.971

6.  Mapping of mitochondrial DNA of individual sheep and goats: rapid evolution in the D loop region.

Authors:  W B Upholt; I B Dawid
Journal:  Cell       Date:  1977-07       Impact factor: 41.582

7.  Mathematical model for studying genetic variation in terms of restriction endonucleases.

Authors:  M Nei; W H Li
Journal:  Proc Natl Acad Sci U S A       Date:  1979-10       Impact factor: 11.205

Review 8.  The significance of the structural and functional similarities of bacteria and mitochondria.

Authors:  S Nass
Journal:  Int Rev Cytol       Date:  1969

9.  Theoretical foundations for a quantitative approach to paleogenetics. Part I: DNA.

Authors:  R Holmquist
Journal:  J Mol Evol       Date:  1971       Impact factor: 2.395

10.  Restriction endonuclease cleavage maps of animal mitochondrial DNAs.

Authors:  W M Brown; J Vinograd
Journal:  Proc Natl Acad Sci U S A       Date:  1974-11       Impact factor: 11.205
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  3 in total

1.  Extensive variation and heteroplasmy in size of mitochondrial DNA among geographic populations of Drosophila melanogaster.

Authors:  L R Hale; R S Singh
Journal:  Proc Natl Acad Sci U S A       Date:  1986-11       Impact factor: 11.205

2.  Restriction map variation in the Adh region of Drosophila.

Authors:  C H Langley; E Montgomery; W F Quattlebaum
Journal:  Proc Natl Acad Sci U S A       Date:  1982-09       Impact factor: 11.205

3.  Human mitochondrial DNA variation and evolution: analysis of nucleotide sequences from seven individuals.

Authors:  C F Aquadro; B D Greenberg
Journal:  Genetics       Date:  1983-02       Impact factor: 4.562
  3 in total

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