Literature DB >> 11641272

Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans.

R F Ketting1, S E Fischer, E Bernstein, T Sijen, G J Hannon, R H Plasterk.   

Abstract

Double-stranded RNAs can suppress expression of homologous genes through an evolutionarily conserved process named RNA interference (RNAi) or post-transcriptional gene silencing (PTGS). One mechanism underlying silencing is degradation of target mRNAs by an RNP complex, which contains approximately 22 nt of siRNAs as guides to substrate selection. A bidentate nuclease called Dicer has been implicated as the protein responsible for siRNA production. Here we characterize the Caenorhabditis elegans ortholog of Dicer (K12H4.8; dcr-1) in vivo and in vitro. dcr-1 mutants show a defect in RNAi. Furthermore, a combination of phenotypic abnormalities and RNA analysis suggests a role for dcr-1 in a regulatory pathway comprised of small temporal RNA (let-7) and its target (e.g., lin-41).

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Year:  2001        PMID: 11641272      PMCID: PMC312808          DOI: 10.1101/gad.927801

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  40 in total

1.  An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells.

Authors:  S M Hammond; E Bernstein; D Beach; G J Hannon
Journal:  Nature       Date:  2000-03-16       Impact factor: 49.962

2.  The rde-1 gene, RNA interference, and transposon silencing in C. elegans.

Authors:  H Tabara; M Sarkissian; W G Kelly; J Fleenor; A Grishok; L Timmons; A Fire; C C Mello
Journal:  Cell       Date:  1999-10-15       Impact factor: 41.582

Review 3.  RNA interference--2001.

Authors:  P A Sharp
Journal:  Genes Dev       Date:  2001-03-01       Impact factor: 11.361

4.  Evidence that processed small dsRNAs may mediate sequence-specific mRNA degradation during RNAi in Drosophila embryos.

Authors:  D Yang; H Lu; J W Erickson
Journal:  Curr Biol       Date:  2000-10-05       Impact factor: 10.834

5.  Functional anatomy of a dsRNA trigger: differential requirement for the two trigger strands in RNA interference.

Authors:  S Parrish; J Fleenor; S Xu; C Mello; A Fire
Journal:  Mol Cell       Date:  2000-11       Impact factor: 17.970

6.  A cellular function for the RNA-interference enzyme Dicer in the maturation of the let-7 small temporal RNA.

Authors:  G Hutvágner; J McLachlan; A E Pasquinelli; E Bálint; T Tuschl; P D Zamore
Journal:  Science       Date:  2001-07-12       Impact factor: 47.728

7.  EGO-1 is related to RNA-directed RNA polymerase and functions in germ-line development and RNA interference in C. elegans.

Authors:  A Smardon; J M Spoerke; S C Stacey; M E Klein; N Mackin; E M Maine
Journal:  Curr Biol       Date:  2000-02-24       Impact factor: 10.834

8.  Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.

Authors:  A Fire; S Xu; M K Montgomery; S A Kostas; S E Driver; C C Mello
Journal:  Nature       Date:  1998-02-19       Impact factor: 49.962

9.  Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing.

Authors:  A Grishok; A E Pasquinelli; D Conte; N Li; S Parrish; I Ha; D L Baillie; A Fire; G Ruvkun; C C Mello
Journal:  Cell       Date:  2001-07-13       Impact factor: 41.582

10.  A counterdefensive strategy of plant viruses: suppression of posttranscriptional gene silencing.

Authors:  K D Kasschau; J C Carrington
Journal:  Cell       Date:  1998-11-13       Impact factor: 41.582

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  678 in total

1.  Stable suppression of gene expression by RNAi in mammalian cells.

Authors:  Patrick J Paddison; Amy A Caudy; Gregory J Hannon
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-29       Impact factor: 11.205

2.  Short hairpin RNAs (shRNAs) induce sequence-specific silencing in mammalian cells.

Authors:  Patrick J Paddison; Amy A Caudy; Emily Bernstein; Gregory J Hannon; Douglas S Conklin
Journal:  Genes Dev       Date:  2002-04-15       Impact factor: 11.361

3.  Induction of RNA interference in Caenorhabditis elegans by RNAs derived from plants exhibiting post-transcriptional gene silencing.

Authors:  Alexandra Boutla; Kriton Kalantidis; Nektarios Tavernarakis; Mina Tsagris; Martin Tabler
Journal:  Nucleic Acids Res       Date:  2002-04-01       Impact factor: 16.971

Review 4.  RNA silencing and the mobile silencing signal.

Authors:  Sizolwenkosi Mlotshwa; Olivier Voinnet; M Florian Mette; Marjori Matzke; Herve Vaucheret; Shou Wei Ding; Gail Pruss; Vicki B Vance
Journal:  Plant Cell       Date:  2002       Impact factor: 11.277

5.  A DNA vector-based RNAi technology to suppress gene expression in mammalian cells.

Authors:  Guangchao Sui; Christina Soohoo; El Bachir Affar; Frédérique Gay; Yujiang Shi; William C Forrester; Yang Shi
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-16       Impact factor: 11.205

6.  The microRNAs of Caenorhabditis elegans.

Authors:  Lee P Lim; Nelson C Lau; Earl G Weinstein; Aliaa Abdelhakim; Soraya Yekta; Matthew W Rhoades; Christopher B Burge; David P Bartel
Journal:  Genes Dev       Date:  2003-04-02       Impact factor: 11.361

7.  siRNAs can function as miRNAs.

Authors:  John G Doench; Christian P Petersen; Phillip A Sharp
Journal:  Genes Dev       Date:  2003-02-15       Impact factor: 11.361

8.  Functional siRNA expression from transfected PCR products.

Authors:  Daniela Castanotto; Haitang Li; John J Rossi
Journal:  RNA       Date:  2002-11       Impact factor: 4.942

9.  A viral suppressor of RNA silencing differentially regulates the accumulation of short interfering RNAs and micro-RNAs in tobacco.

Authors:  Allison C Mallory; Brenda J Reinhart; David Bartel; Vicki B Vance; Lewis H Bowman
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-25       Impact factor: 11.205

10.  Overexpression and purification of Dicer and accessory proteins for biochemical and structural studies.

Authors:  Niladri K Sinha; Brenda L Bass
Journal:  Methods       Date:  2017-07-16       Impact factor: 3.608

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