Literature DB >> 11917031

Induction of RNA interference in Caenorhabditis elegans by RNAs derived from plants exhibiting post-transcriptional gene silencing.

Alexandra Boutla1, Kriton Kalantidis, Nektarios Tavernarakis, Mina Tsagris, Martin Tabler.   

Abstract

The term 'gene silencing' refers to transcriptional and post-transcriptional control of gene expression. Related processes are found across kingdoms in plants and animals. We intended to test whether particular RNA constituents of a silenced plant can induce silencing in an animal. We generated Nicotiana benthamiana lines that expressed green fluorescent protein (GFP) from a transgene. Plants in which GFP expression was spontaneously silenced showed siRNAs characteristic of post-transcriptional gene silencing (PTGS). RNA extracts prepared from silenced plants were injected into a GFP-expressing strain of Caenorhabditis elegans, where they induced RNA interference (RNAi). Extracts from non-silenced plants were inactive. This directly demonstrates a relationship and a mechanistic link between PTGS and RNAi. Controls confirmed that the silencing agent was an RNA. Size fractionation on denaturing gels revealed that an RNA of approximately 85 nt was most active in inducing silencing in the worm. Northern blot analysis of the region in question did not detect a prominent GFP-specific RNA of sense or antisense polarity, indicating that the RNA species which induced silencing was present only in low concentration or did not hybridize due to formation of an intramolecular double strand. In view of its high activity, it is possible that this agent is responsible for the systemic spread of silencing in plants and it might represent the aberrant RNA, a previously postulated inducer of silencing.

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Year:  2002        PMID: 11917031      PMCID: PMC101830          DOI: 10.1093/nar/30.7.1688

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  67 in total

1.  Gene silencing: RNA makes RNA makes no protein.

Authors:  D C Baulcombe
Journal:  Curr Biol       Date:  1999-08-26       Impact factor: 10.834

2.  RNAi as random degradative PCR: siRNA primers convert mRNA into dsRNAs that are degraded to generate new siRNAs.

Authors:  C Lipardi; Q Wei; B M Paterson
Journal:  Cell       Date:  2001-11-02       Impact factor: 41.582

Review 3.  RNA silencing as a plant immune system against viruses.

Authors:  O Voinnet
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Review 4.  A vicious cycle: RNA silencing and DNA methylation in plants.

Authors:  J Bender
Journal:  Cell       Date:  2001-07-27       Impact factor: 41.582

5.  RNA: guiding gene silencing.

Authors:  M Matzke; A J Matzke; J M Kooter
Journal:  Science       Date:  2001-08-10       Impact factor: 47.728

6.  Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans.

Authors:  R F Ketting; S E Fischer; E Bernstein; T Sijen; G J Hannon; R H Plasterk
Journal:  Genes Dev       Date:  2001-10-15       Impact factor: 11.361

7.  Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing.

Authors:  A Grishok; A E Pasquinelli; D Conte; N Li; S Parrish; I Ha; D L Baillie; A Fire; G Ruvkun; C C Mello
Journal:  Cell       Date:  2001-07-13       Impact factor: 41.582

8.  Gene silencing in Neurospora crassa requires a protein homologous to RNA-dependent RNA polymerase.

Authors:  C Cogoni; G Macino
Journal:  Nature       Date:  1999-05-13       Impact factor: 49.962

9.  Specific inhibition of gene expression by small double-stranded RNAs in invertebrate and vertebrate systems.

Authors:  N J Caplen; S Parrish; F Imani; A Fire; R A Morgan
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-31       Impact factor: 11.205

Review 10.  Function, mechanism and regulation of bacterial ribonucleases.

Authors:  A W Nicholson
Journal:  FEMS Microbiol Rev       Date:  1999-06       Impact factor: 16.408

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  9 in total

1.  Gene silencing in Caenorhabditis elegans by transitive RNA interference.

Authors:  Matthew N Alder; Shale Dames; Jeffrey Gaudet; Susan E Mango
Journal:  RNA       Date:  2003-01       Impact factor: 4.942

2.  Analysis of RNA silencing in agroinfiltrated leaves of Nicotiana benthamiana and Nicotiana tabacum.

Authors:  Edyta Kościańska; Kriton Kalantidis; Krzysztof Wypijewski; Jan Sadowski; Martin Tabler
Journal:  Plant Mol Biol       Date:  2005-11       Impact factor: 4.076

3.  Different effects on ACC oxidase gene silencing triggered by RNA interference in transgenic tomato.

Authors:  Ai-Sheng Xiong; Quan-Hong Yao; Ri-He Peng; Xian Li; Pei-Lai Han; Hui-Qin Fan
Journal:  Plant Cell Rep       Date:  2004-10-19       Impact factor: 4.570

4.  Hairpin transcription does not necessarily lead to efficient triggering of the RNAi pathway.

Authors:  Athanasios Dalakouras; Maria Tzanopoulou; Mina Tsagris; Michael Wassenegger; Kriton Kalantidis
Journal:  Transgenic Res       Date:  2010-06-26       Impact factor: 2.788

5.  Tomato chlorotic mottle virus is a target of RNA silencing but the presence of specific short interfering RNAs does not guarantee resistance in transgenic plants.

Authors:  Simone G Ribeiro; Hendrikus Lohuis; Rob Goldbach; Marcel Prins
Journal:  J Virol       Date:  2006-11-29       Impact factor: 5.103

6.  Function and anatomy of plant siRNA pools derived from hairpin transgenes.

Authors:  Bess L Chau; Kevin Aw Lee
Journal:  Plant Methods       Date:  2007-11-25       Impact factor: 4.993

7.  Meeting Review: ESF workshop on 'Impact of nucleic acid chemistry on gene function analysis: antisense, aptamers, ribozymes and RNAi'.

Authors:  Kathrin Heermeier; Hans Prydz; Jutta Reinhard-Rupp; Joachim Engels
Journal:  Comp Funct Genomics       Date:  2002

Review 8.  Molecular mechanisms underlying host-induced gene silencing.

Authors:  Hana Zand Karimi; Roger W Innes
Journal:  Plant Cell       Date:  2022-08-25       Impact factor: 12.085

9.  Disruption of vitellogenin gene function in adult honeybees by intra-abdominal injection of double-stranded RNA.

Authors:  Gro V Amdam; Zilá L P Simões; Karina R Guidugli; Kari Norberg; Stig W Omholt
Journal:  BMC Biotechnol       Date:  2003-01-20       Impact factor: 2.563

  9 in total

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