Literature DB >> 11545588

Probing the structure of F-actin: cross-links constrain atomic models and modify actin dynamics.

A Orlova1, V E Galkin, M S VanLoock, E Kim, A Shvetsov, E Reisler, E H Egelman.   

Abstract

Cross-links between protomers in F-actin can be used as a very sensitive probe of both the dynamics and structure of F-actin. We have characterized filaments formed from a previously described yeast actin Q41C mutant, where disulfide bonds can be formed between the Cys41 that is introduced into subdomain-2 and Cys374 on an adjacent protomer. We find that the distribution of cross-linked n-mers shows no cooperativity and corresponds to a random probability cross-linking reaction. The random distribution suggests that disulfide formation does not cause a significant perturbation of the F-actin structure. Consistent with this lack of perturbation, three-dimensional reconstructions of extensively cross-linked filaments, using a new approach to helical image analysis, show very small structural changes with respect to uncross-linked filaments. This finding is in conflict with refined models but in agreement with the original Holmes et al. model for F-actin. Under conditions where 94 % of the protomers are linked by disulfide bonds, the distribution of filament twist becomes more heterogeneous with respect to control filaments. A molecular model suggests that strain, introduced by the disulfide, is relieved by increasing the twist of the long-pitch actin helices. Disulfide formation makes yeast actin filaments approximately three times less flexible in terms of bending and similar, in this respect, to vertebrate skeletal muscle F-actin. These observations support previous reports that the rigidity of F-actin can be controlled by the position of subdomain-2, and that this region is more flexible in yeast F-actin than in skeletal muscle F-actin. Copyright 2001 Academic Press.

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Year:  2001        PMID: 11545588     DOI: 10.1006/jmbi.2001.4945

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  15 in total

1.  The role of the cytoskeleton in the life cycle of viruses and intracellular bacteria: tracks, motors, and polymerization machines.

Authors:  E L Bearer; P Satpute-Krishnan
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2.  Refinement of F-actin model against fiber diffraction data by long-range normal modes.

Authors:  Yinghao Wu; Jianpeng Ma
Journal:  Biophys J       Date:  2004-01       Impact factor: 4.033

3.  Simulation of F-actin filaments of several microns.

Authors:  Dengming Ming; Yifei Kong; Yinghao Wu; Jianpeng Ma
Journal:  Biophys J       Date:  2003-07       Impact factor: 4.033

4.  Order, disorder, and perturbations in actin-aldolase rafts.

Authors:  Catherine Sukow; David J DeRosier
Journal:  Biophys J       Date:  2003-07       Impact factor: 4.033

5.  G146V mutation at the hinge region of actin reveals a myosin class-specific requirement of actin conformations for motility.

Authors:  Taro Q P Noguchi; Tomotaka Komori; Nobuhisa Umeki; Noriyuki Demizu; Kohji Ito; Atsuko Hikikoshi Iwane; Kiyotaka Tokuraku; Toshio Yanagida; Taro Q P Uyeda
Journal:  J Biol Chem       Date:  2012-05-27       Impact factor: 5.157

6.  The crystal structure of a cross-linked actin dimer suggests a detailed molecular interface in F-actin.

Authors:  Dmitry S Kudryashov; Michael R Sawaya; Helty Adisetiyo; Todd Norcross; György Hegyi; Emil Reisler; Todd O Yeates
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-01       Impact factor: 11.205

7.  Modeling of protein binary complexes using structural mass spectrometry data.

Authors:  J K Amisha Kamal; Mark R Chance
Journal:  Protein Sci       Date:  2007-11-27       Impact factor: 6.725

8.  The structure of bacterial ParM filaments.

Authors:  Albina Orlova; Ethan C Garner; Vitold E Galkin; John Heuser; R Dyche Mullins; Edward H Egelman
Journal:  Nat Struct Mol Biol       Date:  2007-09-16       Impact factor: 15.369

Review 9.  Single-particle reconstruction from EM images of helical filaments.

Authors:  Edward H Egelman
Journal:  Curr Opin Struct Biol       Date:  2007-09-11       Impact factor: 6.809

10.  In vivo and in vitro effects of two novel gamma-actin (ACTG1) mutations that cause DFNA20/26 hearing impairment.

Authors:  Matías Morín; Keith E Bryan; Fernando Mayo-Merino; Richard Goodyear; Angeles Mencía; Silvia Modamio-Høybjør; Ignacio del Castillo; Jessica M Cabalka; Guy Richardson; Felipe Moreno; Peter A Rubenstein; Miguel Angel Moreno-Pelayo
Journal:  Hum Mol Genet       Date:  2009-05-28       Impact factor: 6.150

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