Literature DB >> 11539446

Alternative bases in the RNA world: the prebiotic synthesis of urazole and its ribosides.

V M Kolb1, J P Dworkin, S L Miller.   

Abstract

Urazole is a five-membered heterocyclic compound which is isosteric with uracil's hydrogen-bonding segment. Urazole reacts spontaneoulsy with ribose (and other aldoses) to give a mixture of four ribosides: alpha and beta pyranosides and furanosides. This reaction occurs in aqueous solution at mild temperatures. Thermodynamic and kinetic parameters for the reaction of urazole with ribose were determined. In contrast, uracil is completely unreactive with ribose under these conditions. Urazole's unusual reactivity is ascribed to the hydrazine portion of the molecule. Urazole can be synthesized from biuret and hydrazine under prebiotic conditions. The prebiotic synthesis of guanazole, which is isosteric in part to diaminopyrimidine and cytosine, is accomplished from dicyandiamide and hydrazine. Kinetic parameters for both prebiotic reactions were measured. Urazole and guanazole are transparent in the UV, which would be a favorable property in the absence of an ozone layer on the early Earth. Urazole makes hydrogen bonds with adenine in DMSO similar to those of uracil, as established by H NMR. All of these properties make urazole an attractive potential precursor to uracil and guanazole a potential precursor to cytosine in the RNA or pre-RNA world.

Entities:  

Keywords:  NASA Discipline Exobiology; Non-NASA Center

Mesh:

Substances:

Year:  1994        PMID: 11539446     DOI: 10.1007/bf00175873

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  12 in total

1.  Uridine and deoxyuridine phosphorylases from Ehrlich ascites tumor.

Authors:  H PONTIS; G DEGERSTEDT; P REICHARD
Journal:  Biochim Biophys Acta       Date:  1961-07-22

2.  Enzymatic incorporation of a new base pair into DNA and RNA extends the genetic alphabet.

Authors:  J A Piccirilli; T Krauch; S E Moroney; S A Benner
Journal:  Nature       Date:  1990-01-04       Impact factor: 49.962

3.  Nonenzymatic template-directed synthesis of informational macromolecules.

Authors:  G F Joyce
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1987

4.  The case for an ancestral genetic system involving simple analogues of the nucleotides.

Authors:  G F Joyce; A W Schwartz; S L Miller; L E Orgel
Journal:  Proc Natl Acad Sci U S A       Date:  1987-07       Impact factor: 11.205

5.  Studies in prebiotic synthesis. VI. Synthesis of purine nucleosides.

Authors:  W D Fuller; R A Sanchez; L E Orgel
Journal:  J Mol Biol       Date:  1972-06-14       Impact factor: 5.469

6.  Uridine phosphorylase, molecular properties and mechanism of catalysis.

Authors:  R Bose; E W Yamada
Journal:  Biochemistry       Date:  1974-05-07       Impact factor: 3.162

7.  Carbon-13 magnetic resonance. 18. Selected nucleosides.

Authors:  A J Jones; D M Grant; M W Winkley; R K Robins
Journal:  J Phys Chem       Date:  1970-06-25

8.  The chemical synthesis of the 1,2,4-triazole nucleosides related to uridine,2'-deoxyuridine, thymidine, and cytidine.

Authors:  J T Witkowski; R K Robins
Journal:  J Org Chem       Date:  1970-08       Impact factor: 4.354

9.  The standard Gibbs free energy change of hydrolysis of alpha-D-ribose 1-phosphate.

Authors:  M Camici; F Sgarrella; P L Ipata; U Mura
Journal:  Arch Biochem Biophys       Date:  1980-11       Impact factor: 4.013

10.  Prebiotic ribose synthesis: a critical analysis.

Authors:  R Shapiro
Journal:  Orig Life Evol Biosph       Date:  1988       Impact factor: 1.950

View more
  21 in total

1.  On the plausibility of a UV transparent biochemistry.

Authors:  Charles S Cockell; Alessandro Airo
Journal:  Orig Life Evol Biosph       Date:  2002-06       Impact factor: 1.950

2.  Importance of biologically active aurora-like ultraviolet emission: stochastic irradiation of Earth and Mars by flares and explosions.

Authors:  David S Smith; John Scalo; J Craig Wheeler
Journal:  Orig Life Evol Biosph       Date:  2004-10       Impact factor: 1.950

3.  Mars primordial crust: unique sites for investigating proto-biologic properties.

Authors:  Randall S Perry; William K Hartmann
Journal:  Orig Life Evol Biosph       Date:  2006-12       Impact factor: 1.950

4.  The stability of the RNA bases: implications for the origin of life.

Authors:  M Levy; S L Miller
Journal:  Proc Natl Acad Sci U S A       Date:  1998-07-07       Impact factor: 11.205

5.  OSIRIS-REx Contamination Control Strategy and Implementation.

Authors:  J P Dworkin; L A Adelman; T Ajluni; A V Andronikov; J C Aponte; A E Bartels; E Beshore; E B Bierhaus; J R Brucato; B H Bryan; A S Burton; M P Callahan; S L Castro-Wallace; B C Clark; S J Clemett; H C Connolly; W E Cutlip; S M Daly; V E Elliott; J E Elsila; H L Enos; D F Everett; I A Franchi; D P Glavin; H V Graham; J E Hendershot; J W Harris; S L Hill; A R Hildebrand; G O Jayne; R W Jenkens; K S Johnson; J S Kirsch; D S Lauretta; A S Lewis; J J Loiacono; C C Lorentson; J R Marshall; M G Martin; L L Matthias; H L McLain; S R Messenger; R G Mink; J L Moore; K Nakamura-Messenger; J A Nuth; C V Owens; C L Parish; B D Perkins; M S Pryzby; C A Reigle; K Righter; B Rizk; J F Russell; S A Sandford; J P Schepis; J Songer; M F Sovinski; S E Stahl; K Thomas-Keprta; J M Vellinga; M S Walker
Journal:  Space Sci Rev       Date:  2017-12-13       Impact factor: 8.017

6.  Hydrolytic Fitness of N-glycosyl Bonds: Comparing the Deglycosylation Kinetics of Modified, Alternative and Native Nucleosides.

Authors:  Andro C Rios; Hiu T Yu; Yitzhak Tor
Journal:  J Phys Org Chem       Date:  2015-03       Impact factor: 2.391

Review 7.  Molecular evolution in bacteria.

Authors:  J T Trevors
Journal:  Antonie Van Leeuwenhoek       Date:  1995       Impact factor: 2.271

Review 8.  The search for missing links between self-replicating nucleic acids and the RNA world.

Authors:  K D James; A D Ellington
Journal:  Orig Life Evol Biosph       Date:  1995-12       Impact factor: 1.950

Review 9.  Primitive genetic polymers.

Authors:  Aaron E Engelhart; Nicholas V Hud
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-05-12       Impact factor: 10.005

10.  Attempted prebiotic synthesis of pseudouridine.

Authors:  J P Dworkin
Journal:  Orig Life Evol Biosph       Date:  1997-08       Impact factor: 1.950

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.