Literature DB >> 11530018

Changing the amino acid specificity of yeast tyrosyl-tRNA synthetase by genetic engineering.

S Ohno1, T Yokogawa, K Nishikawa.   

Abstract

In an attempt to generate mutant aminoacyl-tRNA synthetases capable of charging non-canonical amino acids, a series of yeast tyrosyl-tRNA synthetase (TyrRS) mutants was constructed by site-specific mutagenesis of putative active site residues, which were deduced by analogy with those of Bacillus stearothermophilus TyrRS. Among these mutants, one with the replacement of tyrosine at position 43 by glycine, "Y43G," was found to be able to utilize several 3-substituted tyrosine analogues as substrates for aminoacylation. The catalytic efficiency (k(cat)/K(m)) of mutant Y43G for aminoacylation with L-tyrosine was about 400-fold decreased as compared to that of the wild-type TyrRS. On the other hand, the ability to utilize 3-iodo-L-tyrosine was newly generated in this mutant TyrRS, since the wild-type TyrRS could not accept 3-iodo-L-tyrosine at all under physiological conditions. This mutant TyrRS should serve as a new tool for site-specific incorporation of non-canonical amino acids, such as those in 3-substituted tyrosine analogues, into proteins in an appropriate translation system in vivo or in vitro.

Entities:  

Mesh:

Substances:

Year:  2001        PMID: 11530018     DOI: 10.1093/oxfordjournals.jbchem.a003001

Source DB:  PubMed          Journal:  J Biochem        ISSN: 0021-924X            Impact factor:   3.387


  9 in total

1.  Antizyme frameshifting as a functional probe of eukaryotic translational termination.

Authors:  Zemfira N Karamysheva; Andrey L Karamyshev; Koichi Ito; Takashi Yokogawa; Kazuya Nishikawa; Yoshikazu Nakamura; Senya Matsufuji
Journal:  Nucleic Acids Res       Date:  2003-10-15       Impact factor: 16.971

Review 2.  Applications of two-dimensional infrared spectroscopy.

Authors:  Amanda L Le Sueur; Rachel E Horness; Megan C Thielges
Journal:  Analyst       Date:  2015-07-07       Impact factor: 4.616

3.  Site-specific incorporation of an unnatural amino acid into proteins in mammalian cells.

Authors:  Kensaku Sakamoto; Akiko Hayashi; Ayako Sakamoto; Daisuke Kiga; Hiroshi Nakayama; Akiko Soma; Takatsugu Kobayashi; Makoto Kitabatake; Koji Takio; Kazuki Saito; Mikako Shirouzu; Ichiro Hirao; Shigeyuki Yokoyama
Journal:  Nucleic Acids Res       Date:  2002-11-01       Impact factor: 16.971

4.  Functional replacement of the endogenous tyrosyl-tRNA synthetase-tRNATyr pair by the archaeal tyrosine pair in Escherichia coli for genetic code expansion.

Authors:  Fumie Iraha; Kenji Oki; Takatsugu Kobayashi; Satoshi Ohno; Takashi Yokogawa; Kazuya Nishikawa; Shigeyuki Yokoyama; Kensaku Sakamoto
Journal:  Nucleic Acids Res       Date:  2010-02-16       Impact factor: 16.971

5.  An engineered Escherichia coli tyrosyl-tRNA synthetase for site-specific incorporation of an unnatural amino acid into proteins in eukaryotic translation and its application in a wheat germ cell-free system.

Authors:  Daisuke Kiga; Kensaku Sakamoto; Koichiro Kodama; Takanori Kigawa; Takayoshi Matsuda; Takashi Yabuki; Mikako Shirouzu; Yoko Harada; Hiroshi Nakayama; Koji Takio; Yoshinori Hasegawa; Yaeta Endo; Ichiro Hirao; Shigeyuki Yokoyama
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-03       Impact factor: 11.205

6.  Mutational separation of aminoacylation and cytokine activities of human tyrosyl-tRNA synthetase.

Authors:  Mili Kapoor; Francella J Otero; Bonnie M Slike; Karla L Ewalt; Xiang-Lei Yang
Journal:  Chem Biol       Date:  2009-05-29

7.  Optimization of the hybridization-based method for purification of thermostable tRNAs in the presence of tetraalkylammonium salts.

Authors:  Takashi Yokogawa; Yusuke Kitamura; Daigo Nakamura; Satoshi Ohno; Kazuya Nishikawa
Journal:  Nucleic Acids Res       Date:  2009-12-29       Impact factor: 16.971

Review 8.  Unnatural base pair systems toward the expansion of the genetic alphabet in the central dogma.

Authors:  Ichiro Hirao; Michiko Kimoto
Journal:  Proc Jpn Acad Ser B Phys Biol Sci       Date:  2012       Impact factor: 3.493

9.  Structural basis for recognition of cognate tRNA by tyrosyl-tRNA synthetase from three kingdoms.

Authors:  Masaru Tsunoda; Yoshio Kusakabe; Nobutada Tanaka; Satoshi Ohno; Masashi Nakamura; Toshiya Senda; Tomohisa Moriguchi; Norio Asai; Mitsuo Sekine; Takashi Yokogawa; Kazuya Nishikawa; Kazuo T Nakamura
Journal:  Nucleic Acids Res       Date:  2007-06-18       Impact factor: 16.971

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.