Literature DB >> 11460548

Magnetic relaxation dispersion studies of biomolecular solutions.

B Halle1, V P Denisov.   

Abstract

Although the MRD method has a long record in biomolecular systems, it has undergone a renaissance in the past few years as methodological developments have provided access to new types of information. In particular, MRD studies of quadrupolar nuclei such as 17O and 23Na have yielded valuable insights about the interactions of proteins and oligonucleotides with their solvent environment. The biomolecular MRD literature is still dominated by hydration studies, but the method has also been used to study the interaction of organic cosolvents and inorganic counterions with biomolecules. The MRD method can potentially make important contributions to the understanding of the mechanisms whereby protein conformational stability is affected by nonaqueous solvent components, such as denaturants, stabilizers, and helix promoters. Residence times of water molecules and other low molecular weight species in association with biomolecules can be determined by MRD. Such residence times are of general interest for understanding the kinetics of biomolecule-ligand interactions and, when exchange is gated by the biomolecule, can be used to characterize large-scale conformational fluctuations on nanosecond-millisecond time scales. By monitoring the integrity and specific internal hydration sites as well as the global solvent exposure, the MRD method can also shed light on the structure and dynamics of biomolecules in fluctuating nonnative states. Because it does not rely on high resolution, the MRD method is also applicable to very large biomolecules and complexes and has even been used to investigate protein crystals, gels, and biological tissues. In fact, dynamic studies of solids and liquid crystals were among the earliest applications of the MRD method. In many of its diverse applications, the MRD method provides unique information, complementing that available from high-resolution NMR.

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Year:  2001        PMID: 11460548     DOI: 10.1016/s0076-6879(02)38220-x

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  22 in total

1.  Protein self-association in solution: the bovine beta -lactoglobulin dimer and octamer.

Authors:  Michael Gottschalk; Hanna Nilsson; Helena Roos; Bertil Halle
Journal:  Protein Sci       Date:  2003-11       Impact factor: 6.725

2.  Hyper-mobile water is induced around actin filaments.

Authors:  Syed Rashel Kabir; Keiichi Yokoyama; Koshin Mihashi; Takao Kodama; Makoto Suzuki
Journal:  Biophys J       Date:  2003-11       Impact factor: 4.033

Review 3.  Protein hydration dynamics in solution: a critical survey.

Authors:  Bertil Halle
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2004-08-29       Impact factor: 6.237

4.  Stability of HAMLET--a kinetically trapped alpha-lactalbumin oleic acid complex.

Authors:  Jonas Fast; Ann-Kristin Mossberg; Catharina Svanborg; Sara Linse
Journal:  Protein Sci       Date:  2005-02       Impact factor: 6.725

Review 5.  Protein-solvent interactions.

Authors:  Ninad Prabhu; Kim Sharp
Journal:  Chem Rev       Date:  2006-05       Impact factor: 60.622

6.  Solute-induced retardation of water dynamics probed directly by terahertz spectroscopy.

Authors:  U Heugen; G Schwaab; E Bründermann; M Heyden; X Yu; D M Leitner; M Havenith
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-08       Impact factor: 11.205

7.  Pressure dependence of side chain 13C chemical shifts in model peptides Ac-Gly-Gly-Xxx-Ala-NH2.

Authors:  Markus Beck Erlach; Joerg Koehler; Edson Crusca; Claudia E Munte; Masatsune Kainosho; Werner Kremer; Hans Robert Kalbitzer
Journal:  J Biomol NMR       Date:  2017-09-14       Impact factor: 2.835

8.  Anesthetic interaction with ketosteroid isomerase: insights from molecular dynamics simulations.

Authors:  Michael J Yonkunas; Yan Xu; Pei Tang
Journal:  Biophys J       Date:  2005-07-22       Impact factor: 4.033

9.  Water-Protein Interactions Coupled with Protein Conformational Transition.

Authors:  Soichiro Kitazawa; Yu Aoshima; Takuro Wakamoto; Ryo Kitahara
Journal:  Biophys J       Date:  2018-08-08       Impact factor: 4.033

10.  Protein self-association in solution: the bovine pancreatic trypsin inhibitor decamer.

Authors:  Michael Gottschalk; Kandadai Venu; Bertil Halle
Journal:  Biophys J       Date:  2003-06       Impact factor: 4.033

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