Literature DB >> 11447258

The relaxation dynamics of the excited electronic states of retinal in bacteriorhodopsin by two-pump-probe femtosecond studies.

S L Logunov1, V V Volkov, M Braun, M A El-Sayed.   

Abstract

We present the results of two-pump and probe femtosecond experiments designed to follow the relaxation dynamics of the lowest excited state (S(1)) populated by different modes. In the first mode, a direct (S(0) --> S(1)) radiative excitation of the ground state is used. In the second mode, an indirect excitation is used where the S(1) state is populated by the use of two femtosecond laser pulses with different colors and delay times between them. The first pulse excites the S(0) --> S(1) transition whereas the second pulse excites the S(1) --> S(n) transition. The nonradiative relaxation from the S(n) state populates the lowest excited state. Our results suggest that the S(1) state relaxes faster when populated nonradiatively from the S(n) state than when pumped directly by the S(0) --> S(1) excitation. Additionally, the S(n) --> S(1) nonradiative relaxation time is found to change by varying the delay time between the two pump pulses. The observed dependence of the lowest excited state population as well as its dependence on the delay between the two pump pulses are found to fit a kinetic model in which the S(n) state populates a different surface (called S'(1)) than the one being directly excited (S(1)). The possible involvement of the A(g) type states, the J intermediate, and the conical intersection leading to the S(0) or to the isomerization product (K intermediate) are discussed in the framework of the proposed model.

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Year:  2001        PMID: 11447258      PMCID: PMC37460          DOI: 10.1073/pnas.141220198

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  16 in total

1.  Bacteriorhodopsin: a light-driven proton pump in Halobacterium Halobium.

Authors:  R H Lozier; R A Bogomolni; W Stoeckenius
Journal:  Biophys J       Date:  1975-09       Impact factor: 4.033

2.  Conformational energetics and excited state level ordering in 11-cis retinal.

Authors:  J R Tallent; J R Birge; C F Zhang; E Wenderholm; R R Birge
Journal:  Photochem Photobiol       Date:  1992-12       Impact factor: 3.421

3.  Early picosecond events in the photocycle of bacteriorhodopsin.

Authors:  H J Polland; M A Franz; W Zinth; W Kaiser; E Kölling; D Oesterhelt
Journal:  Biophys J       Date:  1986-03       Impact factor: 4.033

Review 4.  Chemical dynamics in proteins: the photoisomerization of retinal in bacteriorhodopsin.

Authors:  F Gai; K C Hasson; J C McDonald; P A Anfinrud
Journal:  Science       Date:  1998-03-20       Impact factor: 47.728

5.  Direct observation of the femtosecond excited-state cis-trans isomerization in bacteriorhodopsin.

Authors:  R A Mathies; C H Brito Cruz; W T Pollard; C V Shank
Journal:  Science       Date:  1988-05-06       Impact factor: 47.728

6.  Resonance Raman spectra of bacteriorhodopsin's primary photoproduct: evidence for a distorted 13-cis retinal chromophore.

Authors:  M Braiman; R Mathies
Journal:  Proc Natl Acad Sci U S A       Date:  1982-01       Impact factor: 11.205

7.  Rhodopsin-like protein from the purple membrane of Halobacterium halobium.

Authors:  D Oesterhelt; W Stoeckenius
Journal:  Nat New Biol       Date:  1971-09-29

8.  Computational evidence in favor of a two-state, two-mode model of the retinal chromophore photoisomerization.

Authors:  R González-Luque; M Garavelli; F Bernardi; M Merchán; M A Robb; M Olivucci
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-15       Impact factor: 11.205

9.  Effect of protonation on the isomerization properties of n-butylamine Schiff base of isomeric retinal as revealed by direct HPLC analyses: selection of isomerization pathways by retinal proteins.

Authors:  Y Koyama; K Kubo; M Komori; H Yasuda; Y Mukai
Journal:  Photochem Photobiol       Date:  1991-09       Impact factor: 3.421

10.  Vibrational spectroscopy of bacteriorhodopsin mutants: light-driven proton transport involves protonation changes of aspartic acid residues 85, 96, and 212.

Authors:  M S Braiman; T Mogi; T Marti; L J Stern; H G Khorana; K J Rothschild
Journal:  Biochemistry       Date:  1988-11-15       Impact factor: 3.162

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  9 in total

1.  Comparison of the dynamics of the primary events of bacteriorhodopsin in its trimeric and monomeric states.

Authors:  Jianping Wang; Stephan Link; Colin D Heyes; Mostafa A El-Sayed
Journal:  Biophys J       Date:  2002-09       Impact factor: 4.033

2.  Incoherent manipulation of the photoactive yellow protein photocycle with dispersed pump-dump-probe spectroscopy.

Authors:  Delmar S Larsen; Ivo H M van Stokkum; Mikas Vengris; Michael A van Der Horst; Frank L de Weerd; Klaas J Hellingwerf; Rienk van Grondelle
Journal:  Biophys J       Date:  2004-09       Impact factor: 4.033

3.  Photoisomerization and photoionization of the photoactive yellow protein chromophore in solution.

Authors:  Delmar S Larsen; Mikas Vengris; Ivo H M van Stokkum; Michael A van der Horst; Frank L de Weerd; Klaas J Hellingwerf; Rienk van Grondelle
Journal:  Biophys J       Date:  2004-04       Impact factor: 4.033

4.  Aborted double bicycle-pedal isomerization with hydrogen bond breaking is the primary event of bacteriorhodopsin proton pumping.

Authors:  Piero Altoè; Alessandro Cembran; Massimo Olivucci; Marco Garavelli
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-03       Impact factor: 11.205

5.  Uncovering the hidden ground state of green fluorescent protein.

Authors:  John T M Kennis; Delmar S Larsen; Ivo H M van Stokkum; Mikas Vengris; Jasper J van Thor; Rienk van Grondelle
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-17       Impact factor: 11.205

6.  Femtosecond stimulated Raman study of excited-state evolution in bacteriorhodopsin.

Authors:  David W McCamant; Philipp Kukura; Richard A Mathies
Journal:  J Phys Chem B       Date:  2005-05-26       Impact factor: 2.991

7.  Femtochemistry of orange II in solution and in chemical and biological nanocavities.

Authors:  Abderrazzak Douhal; Mikel Sanz; Laura Tormo
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-19       Impact factor: 11.205

8.  Control of retinal isomerization in bacteriorhodopsin in the high-intensity regime.

Authors:  Andrei C Florean; David Cardoza; James L White; J K Lanyi; Roseanne J Sension; Philip H Bucksbaum
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-29       Impact factor: 11.205

9.  Modelling multi-pulse population dynamics from ultrafast spectroscopy.

Authors:  Luuk J G W van Wilderen; Craig N Lincoln; Jasper J van Thor
Journal:  PLoS One       Date:  2011-03-21       Impact factor: 3.240

  9 in total

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