Literature DB >> 11418768

Protein crystal structure solution by fast incorporation of negatively and positively charged anomalous scatterers.

R A Nagem1, Z Dauter, I Polikarpov.   

Abstract

The preparation of derivatives by the traditional methods of soaking is one of the most time-consuming steps in protein crystal structure solution by X-ray diffraction techniques. The 'quick cryosoaking' procedure for derivatization with halides (monovalent anions) offers the possibility of significantly speeding up this process [Dauter et al. (2000), Acta Cryst. D56, 232-237]. In the present work, an extension of this technique is proposed and the use of two different classes of compounds (monovalent and polyvalent cations) that can be successfully utilized in the quick cryosoaking procedure for the derivatization and phasing of protein crystals is described. This approach has been tested on hen egg-white lysozyme and has been successfully used to solve the structure of a novel trypsin inhibitor. The possibility of using cations in the fast cryosoaking procedure gives additional flexibility in the process of derivatization and increases the chances of success in phase determination. This method can be applied to high-throughput crystallographic projects.

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Year:  2001        PMID: 11418768     DOI: 10.1107/s0907444901007260

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  17 in total

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2.  Molecular basis of kainate receptor modulation by sodium.

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Review 3.  Anomalous diffraction in crystallographic phase evaluation.

Authors:  Wayne A Hendrickson
Journal:  Q Rev Biophys       Date:  2014-02       Impact factor: 5.318

4.  Use of europium ions for SAD phasing of lysozyme at the Cu Kα wavelength.

Authors:  Balakrishnan Vijayakumar; Devadasan Velmurugan
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-12-25

5.  In-house SAD phasing with surface-bound cerium ions.

Authors:  K Natesan Vennila; Devadasan Velmurugan
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6.  Identification of nucleic acid binding residues in the FCS domain of the polycomb group protein polyhomeotic.

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7.  Mycobacterium tuberculosis Rv2704 is a member of the YjgF/YER057c/UK114 family.

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8.  Structure determination by multiple-wavelength anomalous dispersion (MAD) at the Pr LIII edge.

Authors:  Sandra Puehringer; Michael Hellmig; Sunbin Liu; Manfred S Weiss; Markus C Wahl; Uwe Mueller
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-07-31

9.  Preliminary crystallographic studies of a Schistosoma mansoni antigen (Sm21.7) dynein light-chain (DLC) domain.

Authors:  M A F Costa; F T G Rodrigues; B C A Chagas; C M F Rezende; A M Goes; R A P Nagem
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-05-24       Impact factor: 1.056

10.  Utility of anion and cation combinations for phasing of protein structures.

Authors:  Ashwani Sharma; Manickam Yogavel; Amit Sharma
Journal:  J Struct Funct Genomics       Date:  2012-05-06
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