Literature DB >> 11285241

SC35 autoregulates its expression by promoting splicing events that destabilize its mRNAs.

A Sureau1, R Gattoni, Y Dooghe, J Stévenin, J Soret.   

Abstract

SC35 belongs to the family of SR proteins that regulate alternative splicing in a concentration-dependent manner in vitro and in vivo. We previously reported that SC35 is expressed through alternatively spliced mRNAs with differing 3' untranslated sequences and stabilities. Here, we show that overexpression of SC35 in HeLa cells results in a significant decrease of endogenous SC35 mRNA levels along with changes in the relative abundance of SC35 alternatively spliced mRNAs. Remarkably, SC35 leads to both an exon inclusion and an intron excision in the 3' untranslated region of its mRNAs. In vitro splicing experiments performed with recombinant SR proteins demonstrate that SC35, but not ASF/SF2 or 9G8, specifically activates these alternative splicing events. Interestingly, the resulting mRNA is very unstable and we present evidence that mRNA surveillance is likely to be involved in this instability. SC35 therefore constitutes the first example of a splicing factor that controls its own expression through activation of splicing events leading to expression of unstable mRNA.

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Year:  2001        PMID: 11285241      PMCID: PMC145484          DOI: 10.1093/emboj/20.7.1785

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  40 in total

1.  The splicing factors 9G8 and SRp20 transactivate splicing through different and specific enhancers.

Authors:  Y Cavaloc; C F Bourgeois; L Kister; J Stévenin
Journal:  RNA       Date:  1999-03       Impact factor: 4.942

2.  Genetic analysis of the SR protein ASF/SF2: interchangeability of RS domains and negative control of splicing.

Authors:  J Wang; S H Xiao; J L Manley
Journal:  Genes Dev       Date:  1998-07-15       Impact factor: 11.361

3.  atSRp30, one of two SF2/ASF-like proteins from Arabidopsis thaliana, regulates splicing of specific plant genes.

Authors:  S Lopato; M Kalyna; S Dorner; R Kobayashi; A R Krainer; A Barta
Journal:  Genes Dev       Date:  1999-04-15       Impact factor: 11.361

4.  Antagonism between RSF1 and SR proteins for both splice-site recognition in vitro and Drosophila development.

Authors:  E Labourier; H M Bourbon; I E Gallouzi; M Fostier; E Allemand; J Tazi
Journal:  Genes Dev       Date:  1999-03-15       Impact factor: 11.361

5.  Substrate specificities of SR proteins in constitutive splicing are determined by their RNA recognition motifs and composite pre-mRNA exonic elements.

Authors:  A Mayeda; G R Screaton; S D Chandler; X D Fu; A R Krainer
Journal:  Mol Cell Biol       Date:  1999-03       Impact factor: 4.272

6.  Selection and characterization of pre-mRNA splicing enhancers: identification of novel SR protein-specific enhancer sequences.

Authors:  T D Schaal; T Maniatis
Journal:  Mol Cell Biol       Date:  1999-03       Impact factor: 4.272

7.  Regulation of Ich-1 pre-mRNA alternative splicing and apoptosis by mammalian splicing factors.

Authors:  Z H Jiang; W J Zhang; Y Rao; J Y Wu
Journal:  Proc Natl Acad Sci U S A       Date:  1998-08-04       Impact factor: 11.205

8.  Isolation of a complementary DNA that encodes the mammalian splicing factor SC35.

Authors:  X D Fu; T Maniatis
Journal:  Science       Date:  1992-04-24       Impact factor: 47.728

9.  Multiple distinct splicing enhancers in the protein-coding sequences of a constitutively spliced pre-mRNA.

Authors:  T D Schaal; T Maniatis
Journal:  Mol Cell Biol       Date:  1999-01       Impact factor: 4.272

10.  Regulated tissue-specific expression of antagonistic pre-mRNA splicing factors.

Authors:  A Hanamura; J F Cáceres; A Mayeda; B R Franza; A R Krainer
Journal:  RNA       Date:  1998-04       Impact factor: 4.942

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  148 in total

Review 1.  Deciphering the role of RNA-binding proteins in the post-transcriptional control of gene expression.

Authors:  Shivendra Kishore; Sandra Luber; Mihaela Zavolan
Journal:  Brief Funct Genomics       Date:  2010-12-01       Impact factor: 4.241

2.  Acetylation and phosphorylation of SRSF2 control cell fate decision in response to cisplatin.

Authors:  Valerie Edmond; Elodie Moysan; Saadi Khochbin; Patrick Matthias; Christian Brambilla; Elisabeth Brambilla; Sylvie Gazzeri; Beatrice Eymin
Journal:  EMBO J       Date:  2010-12-14       Impact factor: 11.598

3.  Global impact of RNA polymerase II elongation inhibition on alternative splicing regulation.

Authors:  Joanna Y Ip; Dominic Schmidt; Qun Pan; Arun K Ramani; Andrew G Fraser; Duncan T Odom; Benjamin J Blencowe
Journal:  Genome Res       Date:  2010-12-16       Impact factor: 9.043

Review 4.  Nonsense-mediated mRNA decay: an intricate machinery that shapes transcriptomes.

Authors:  Søren Lykke-Andersen; Torben Heick Jensen
Journal:  Nat Rev Mol Cell Biol       Date:  2015-09-23       Impact factor: 94.444

5.  An apparent pseudo-exon acts both as an alternative exon that leads to nonsense-mediated decay and as a zero-length exon.

Authors:  Sushma-Nagaraja Grellscheid; Christopher W J Smith
Journal:  Mol Cell Biol       Date:  2006-03       Impact factor: 4.272

6.  Quantitative microarray profiling provides evidence against widespread coupling of alternative splicing with nonsense-mediated mRNA decay to control gene expression.

Authors:  Qun Pan; Arneet L Saltzman; Yoon Ki Kim; Christine Misquitta; Ofer Shai; Lynne E Maquat; Brendan J Frey; Benjamin J Blencowe
Journal:  Genes Dev       Date:  2006-01-15       Impact factor: 11.361

7.  Negative feedback regulation among SR splicing factors encoded by Rbp1 and Rbp1-like in Drosophila.

Authors:  Supriya Kumar; A Javier Lopez
Journal:  EMBO J       Date:  2005-06-16       Impact factor: 11.598

Review 8.  TDP43 and RNA instability in amyotrophic lateral sclerosis.

Authors:  Kaitlin Weskamp; Sami J Barmada
Journal:  Brain Res       Date:  2018-01-31       Impact factor: 3.252

Review 9.  Gene expression networks: competing mRNA decay pathways in mammalian cells.

Authors:  Lynne E Maquat; Chenguang Gong
Journal:  Biochem Soc Trans       Date:  2009-12       Impact factor: 5.407

10.  Regulation of alternative splicing by SRrp86 and its interacting proteins.

Authors:  Jun Li; Ian C Hawkins; Christopher D Harvey; Jennifer L Jennings; Andrew J Link; James G Patton
Journal:  Mol Cell Biol       Date:  2003-11       Impact factor: 4.272

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