Literature DB >> 19909264

Gene expression networks: competing mRNA decay pathways in mammalian cells.

Lynne E Maquat1, Chenguang Gong.   

Abstract

Nonsense-mediated mRNA decay and Staufen1-mediated mRNA decay are mechanistically related pathways that serve distinct purposes. In the present article, we give an overview of each pathway. We describe how a factor that is common to both pathways results in their competition. We also explain how competition between the two pathways contributes to the differentiation of C2C12 myoblasts to multinucleated myotubes.

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Year:  2009        PMID： 19909264      PMCID： PMC3711687          DOI： 10.1042/BST0371287

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN： 0300-5127            Impact factor:   5.407


  65 in total

1.  SC35 autoregulates its expression by promoting splicing events that destabilize its mRNAs.

Authors:  A Sureau; R Gattoni; Y Dooghe; J Stévenin; J Soret
Journal:  EMBO J       Date:  2001-04-02       Impact factor: 11.598

2.  Alternative splicing of intron 3 of the serine/arginine-rich protein 9G8 gene. Identification of flanking exonic splicing enhancers and involvement of 9G8 as a trans-acting factor.

Authors:  F Lejeune; Y Cavaloc; J Stevenin
Journal:  J Biol Chem       Date:  2000-11-28       Impact factor: 5.157

3.  Evidence for a pioneer round of mRNA translation: mRNAs subject to nonsense-mediated decay in mammalian cells are bound by CBP80 and CBP20.

Authors:  Y Ishigaki; X Li; G Serin; L E Maquat
Journal:  Cell       Date:  2001-09-07       Impact factor: 41.582

4.  Identification of a human decapping complex associated with hUpf proteins in nonsense-mediated decay.

Authors:  Jens Lykke-Andersen
Journal:  Mol Cell Biol       Date:  2002-12       Impact factor: 4.272

5.  The exon junction complex is detected on CBP80-bound but not eIF4E-bound mRNA in mammalian cells: dynamics of mRNP remodeling.

Authors:  Fabrice Lejeune; Yasuhito Ishigaki; Xiaojie Li; Lynne E Maquat
Journal:  EMBO J       Date:  2002-07-01       Impact factor: 11.598

6.  Translation is required to remove Y14 from mRNAs in the cytoplasm.

Authors:  Josée Dostie; Gideon Dreyfuss
Journal:  Curr Biol       Date:  2002-07-09       Impact factor: 10.834

Review 7.  The mammalian nonsense-mediated mRNA decay pathway: to decay or not to decay! Which players make the decision?

Authors:  Ana Luísa Silva; Luísa Romão
Journal:  FEBS Lett       Date:  2009-01-20       Impact factor: 4.124

8.  Characterization of the biochemical properties of the human Upf1 gene product that is involved in nonsense-mediated mRNA decay.

Authors:  A Bhattacharya; K Czaplinski; P Trifillis; F He; A Jacobson; S W Peltz
Journal:  RNA       Date:  2000-09       Impact factor: 4.942

9.  Rent1, a trans-effector of nonsense-mediated mRNA decay, is essential for mammalian embryonic viability.

Authors:  S M Medghalchi; P A Frischmeyer; J T Mendell; A G Kelly; A M Lawler; H C Dietz
Journal:  Hum Mol Genet       Date:  2001-01-15       Impact factor: 6.150

10.  Regulation of multiple core spliceosomal proteins by alternative splicing-coupled nonsense-mediated mRNA decay.

Authors:  Arneet L Saltzman; Yoon Ki Kim; Qun Pan; Matthew M Fagnani; Lynne E Maquat; Benjamin J Blencowe
Journal:  Mol Cell Biol       Date:  2008-04-28       Impact factor: 4.272
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  23 in total

1.  Oral colonization by Streptococcus mutans and caries development is reduced upon deletion of carbonic anhydrase VI expression in saliva.

Authors:  David J Culp; Bently Robinson; Seppo Parkkila; Pei-Wen Pan; Melanie N Cash; Helen N Truong; Thomas W Hussey; Sarah L Gullett
Journal:  Biochim Biophys Acta       Date:  2011-09-16

2.  Mechanism of escape from nonsense-mediated mRNA decay of human beta-globin transcripts with nonsense mutations in the first exon.

Authors:  Gabriele Neu-Yilik; Beate Amthor; Niels H Gehring; Sharif Bahri; Helena Paidassi; Matthias W Hentze; Andreas E Kulozik
Journal:  RNA       Date:  2011-03-09       Impact factor: 4.942

3.  Expression of truncated eukaryotic initiation factor 3e (eIF3e) resulting from integration of mouse mammary tumor virus (MMTV) causes a shift from cap-dependent to cap-independent translation.

Authors:  David Chiluiza; Sharon Bargo; Robert Callahan; Robert E Rhoads
Journal:  J Biol Chem       Date:  2011-07-07       Impact factor: 5.157

4.  Identification of hundreds of novel UPF1 target transcripts by direct determination of whole transcriptome stability.

Authors:  Hidenori Tani; Naoto Imamachi; Kazi Abdus Salam; Rena Mizutani; Kenichi Ijiri; Takuma Irie; Tetsushi Yada; Yutaka Suzuki; Nobuyoshi Akimitsu
Journal:  RNA Biol       Date:  2012-10-12       Impact factor: 4.652

5.  Translation, stability, and resistance to decapping of mRNAs containing caps substituted in the triphosphate chain with BH3, Se, and NH.

Authors:  Wei Su; Sergey Slepenkov; Ewa Grudzien-Nogalska; Joanna Kowalska; Marta Kulis; Joanna Zuberek; Maciej Lukaszewicz; Edward Darzynkiewicz; Jacek Jemielity; Robert E Rhoads
Journal:  RNA       Date:  2011-03-29       Impact factor: 4.942

Review 6.  RNA decay modulates gene expression and controls its fidelity.

Authors:  Shubhendu Ghosh; Allan Jacobson
Journal:  Wiley Interdiscip Rev RNA       Date:  2010 Nov-Dec       Impact factor: 9.957

Review 7.  Nonsense-mediated mRNA decay: inter-individual variability and human disease.

Authors:  Lam Son Nguyen; Miles F Wilkinson; Jozef Gecz
Journal:  Neurosci Biobehav Rev       Date:  2013-11-14       Impact factor: 8.989

Review 8.  Staufen-mediated mRNA decay.

Authors:  Eonyoung Park; Lynne E Maquat
Journal:  Wiley Interdiscip Rev RNA       Date:  2013-05-16       Impact factor: 9.957

9.  Control of myogenesis by rodent SINE-containing lncRNAs.

Authors:  Jiashi Wang; Chenguang Gong; Lynne E Maquat
Journal:  Genes Dev       Date:  2013-04-04       Impact factor: 11.361

Review 10.  Targeting of viral RNAs by Upf1-mediated RNA decay pathways.

Authors:  Jared P May; Anne E Simon
Journal:  Curr Opin Virol       Date:  2020-12-17       Impact factor: 7.090
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