Literature DB >> 29395044

TDP43 and RNA instability in amyotrophic lateral sclerosis.

Kaitlin Weskamp1, Sami J Barmada2.   

Abstract

The nuclear RNA-binding protein TDP43 is integrally involved in RNA processing. In accord with this central function, TDP43 levels are tightly regulated through a negative feedback loop, in which TDP43 recognizes its own RNA transcript, destabilizes it, and reduces new TDP43 protein production. In the neurodegenerative disorder amyotrophic lateral sclerosis (ALS), cytoplasmic mislocalization and accumulation of TDP43 disrupt autoregulation; conversely, inefficient TDP43 autoregulation can lead to cytoplasmic TDP43 deposition and subsequent neurodegeneration. Because TDP43 plays a multifaceted role in maintaining RNA metabolism, its mislocalization and accumulation interrupt several RNA processing pathways that in turn affect RNA stability and gene expression. TDP43-mediated disruption of these pathways-including alternative mRNA splicing, non-coding RNA processing, and RNA granule dynamics-may directly or indirectly contribute to ALS pathogenesis. Therefore, strategies that restore effective TDP43 autoregulation may ultimately prevent neurodegeneration in ALS and related disorders.
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Alternative splicing; Autoregulation; Disease; Neurodegeneration; Non-coding RNA; Nonsense mediated mRNA decay; RNA; Stress granule

Mesh:

Substances:

Year:  2018        PMID: 29395044      PMCID: PMC5997512          DOI: 10.1016/j.brainres.2018.01.015

Source DB:  PubMed          Journal:  Brain Res        ISSN: 0006-8993            Impact factor:   3.252


  138 in total

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2.  TDP-43 is directed to stress granules by sorbitol, a novel physiological osmotic and oxidative stressor.

Authors:  Colleen M Dewey; Basar Cenik; Chantelle F Sephton; Daniel R Dries; Paul Mayer; Shannon K Good; Brett A Johnson; Joachim Herz; Gang Yu
Journal:  Mol Cell Biol       Date:  2010-12-20       Impact factor: 4.272

3.  Transcriptome-wide analysis of TDP-43 binding small RNAs identifies miR-NID1 (miR-8485), a novel miRNA that represses NRXN1 expression.

Authors:  Zhen Fan; Xiaowei Chen; Runsheng Chen
Journal:  Genomics       Date:  2013-07-01       Impact factor: 5.736

4.  TDP-43 promotes microRNA biogenesis as a component of the Drosha and Dicer complexes.

Authors:  Yukio Kawahara; Ai Mieda-Sato
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-09       Impact factor: 11.205

5.  Loss of nuclear TDP-43 in amyotrophic lateral sclerosis (ALS) causes altered expression of splicing machinery and widespread dysregulation of RNA splicing in motor neurones.

Authors:  J Robin Highley; Janine Kirby; Joeri A Jansweijer; Philip S Webb; Channa A Hewamadduma; Paul R Heath; Adrian Higginbottom; Rohini Raman; Laura Ferraiuolo; Johnathan Cooper-Knock; Christopher J McDermott; Stephen B Wharton; Pamela J Shaw; Paul G Ince
Journal:  Neuropathol Appl Neurobiol       Date:  2014-10       Impact factor: 8.090

6.  Cytoplasmic mislocalization of TDP-43 is toxic to neurons and enhanced by a mutation associated with familial amyotrophic lateral sclerosis.

Authors:  Sami J Barmada; Gaia Skibinski; Erica Korb; Elizabeth J Rao; Jane Y Wu; Steven Finkbeiner
Journal:  J Neurosci       Date:  2010-01-13       Impact factor: 6.167

7.  Cytoplasmic protein aggregates interfere with nucleocytoplasmic transport of protein and RNA.

Authors:  Andreas C Woerner; Frédéric Frottin; Daniel Hornburg; Li R Feng; Felix Meissner; Maria Patra; Jörg Tatzelt; Matthias Mann; Konstanze F Winklhofer; F Ulrich Hartl; Mark S Hipp
Journal:  Science       Date:  2015-12-03       Impact factor: 47.728

8.  TDP-43 is a developmentally regulated protein essential for early embryonic development.

Authors:  Chantelle F Sephton; Shannon K Good; Stan Atkin; Colleen M Dewey; Paul Mayer; Joachim Herz; Gang Yu
Journal:  J Biol Chem       Date:  2009-12-29       Impact factor: 5.157

9.  Natural antisense transcript of natriuretic peptide precursor A (NPPA): structural organization and modulation of NPPA expression.

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10.  Autophagy induction enhances TDP43 turnover and survival in neuronal ALS models.

Authors:  Sami J Barmada; Andrea Serio; Arpana Arjun; Bilada Bilican; Aaron Daub; D Michael Ando; Andrey Tsvetkov; Michael Pleiss; Xingli Li; Daniel Peisach; Christopher Shaw; Siddharthan Chandran; Steven Finkbeiner
Journal:  Nat Chem Biol       Date:  2014-06-29       Impact factor: 15.040

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  15 in total

Review 1.  The Role of TDP-43 in Neurodegenerative Disease.

Authors:  Yan-Zhe Liao; Jing Ma; Jie-Zhi Dou
Journal:  Mol Neurobiol       Date:  2022-05-02       Impact factor: 5.590

Review 2.  Molecular Mechanisms Underlying TDP-43 Pathology in Cellular and Animal Models of ALS and FTLD.

Authors:  Alistair Wood; Yuval Gurfinkel; Nicole Polain; Wesley Lamont; Sarah Lyn Rea
Journal:  Int J Mol Sci       Date:  2021-04-29       Impact factor: 5.923

Review 3.  Connecting RNA-Modifying Similarities of TDP-43, FUS, and SOD1 with MicroRNA Dysregulation Amidst A Renewed Network Perspective of Amyotrophic Lateral Sclerosis Proteinopathy.

Authors:  Jade Pham; Matt Keon; Samuel Brennan; Nitin Saksena
Journal:  Int J Mol Sci       Date:  2020-05-14       Impact factor: 5.923

4.  Auto-regulatory feedback by RNA-binding proteins.

Authors:  Michaela Müller-McNicoll; Oliver Rossbach; Jingyi Hui; Jan Medenbach
Journal:  J Mol Cell Biol       Date:  2019-10-25       Impact factor: 6.216

5.  HDAC6 inhibition restores TDP-43 pathology and axonal transport defects in human motor neurons with TARDBP mutations.

Authors:  Raheem Fazal; Steven Boeynaems; Ann Swijsen; Mathias De Decker; Laura Fumagalli; Matthieu Moisse; Joni Vanneste; Wenting Guo; Ruben Boon; Thomas Vercruysse; Kristel Eggermont; Bart Swinnen; Jimmy Beckers; Donya Pakravan; Tijs Vandoorne; Pieter Vanden Berghe; Catherine Verfaillie; Ludo Van Den Bosch; Philip Van Damme
Journal:  EMBO J       Date:  2021-03-10       Impact factor: 11.598

6.  Common Factors in Neurodegeneration: A Meta-Study Revealing Shared Patterns on a Multi-Omics Scale.

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7.  TDP-43 facilitates milk lipid secretion by post-transcriptional regulation of Btn1a1 and Xdh.

Authors:  Limin Zhao; Hao Ke; Haibo Xu; Guo-Dong Wang; Honglei Zhang; Li Zou; Shu Xiang; Mengyuan Li; Li Peng; Mingfang Zhou; Lingling Li; Lei Ao; Qin Yang; Che-Kun James Shen; Ping Yi; Lu Wang; Baowei Jiao
Journal:  Nat Commun       Date:  2020-01-17       Impact factor: 14.919

Review 8.  From Multi-Omics Approaches to Precision Medicine in Amyotrophic Lateral Sclerosis.

Authors:  Giovanna Morello; Salvatore Salomone; Velia D'Agata; Francesca Luisa Conforti; Sebastiano Cavallaro
Journal:  Front Neurosci       Date:  2020-10-30       Impact factor: 4.677

9.  Somatic TARDBP variants as a cause of semantic dementia.

Authors:  Jeroen van Rooij; Merel O Mol; Shamiram Melhem; Pelle van der Wal; Pascal Arp; Francesca Paron; Laura Donker Kaat; Harro Seelaar; Suzanne S M Miedema; Takuya Oshima; Bart J L Eggen; André Uitterlinden; Joyce van Meurs; Ronald E van Kesteren; August B Smit; Emanuele Buratti; John C van Swieten
Journal:  Brain       Date:  2020-12-01       Impact factor: 13.501

10.  Frontotemporal dementia-linked P112H mutation of TDP-43 induces protein structural change and impairs its RNA binding function.

Authors:  Sashank Agrawal; Monika Jain; Wei-Zen Yang; Hanna S Yuan
Journal:  Protein Sci       Date:  2020-11-23       Impact factor: 6.993

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