Literature DB >> 11257493

The TIM-barrel fold: a versatile framework for efficient enzymes.

R K Wierenga1.   

Abstract

Recent studies on triosephosphate isomerase (TIM)-barrel enzymes highlight the remarkable versatility of the TIM-barrel scaffold. At least 15 distinct enzyme families use this framework to generate the appropriate active site geometry, always at the C-terminal end of the eight parallel beta-strands of the barrel. Sequence and structure comparisons now suggest that many of the TIM-barrel enzymes are evolutionarily related. Common structural properties of TIM-barrel enzymes are discussed.

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Year:  2001        PMID: 11257493     DOI: 10.1016/s0014-5793(01)02236-0

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  137 in total

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2.  Crystal structure of the dimethylsulfide monooxygenase DmoA from Hyphomicrobium sulfonivorans.

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Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2018-11-26       Impact factor: 1.056

3.  Crystal structure of histamine dehydrogenase from Nocardioides simplex.

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Review 4.  The phospholipase C isozymes and their regulation.

Authors:  Aurelie Gresset; John Sondek; T Kendall Harden
Journal:  Subcell Biochem       Date:  2012

5.  Crystal structure of Escherichia coli EC1530, a glyoxylate induced protein YgbM.

Authors:  Y Kim; T Skarina; S Beasley; R Laskowski; C Arrowsmith; A Joachimiak; A Edwards; A Savchenko
Journal:  Proteins       Date:  2002-08-01

6.  Crystal structure of Bacillus subtilis ioli shows endonuclase IV fold with altered Zn binding.

Authors:  R-G Zhang; I Dementieva; N Duke; F Collart; E Quaite-Randall; R Alkire; L Dieckman; N Maltsev; O Korolev; A Joachimiak
Journal:  Proteins       Date:  2002-08-01

7.  The Structure Superposition Database.

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Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

8.  Structural Insights into 6-Hydroxypseudooxynicotine Amine Oxidase from Pseudomonas geniculata N1, the Key Enzyme Involved in Nicotine Degradation.

Authors:  Gongquan Liu; Weiwei Wang; Fangyuan He; Peng Zhang; Ping Xu; Hongzhi Tang
Journal:  Appl Environ Microbiol       Date:  2020-09-17       Impact factor: 4.792

9.  Structural characterization of the molecular events during a slow substrate-product transition in orotidine 5'-monophosphate decarboxylase.

Authors:  Masahiro Fujihashi; Lianhu Wei; Lakshmi P Kotra; Emil F Pai
Journal:  J Mol Biol       Date:  2009-02-21       Impact factor: 5.469

10.  Reflections on the catalytic power of a TIM-barrel.

Authors:  John P Richard; Xiang Zhai; M Merced Malabanan
Journal:  Bioorg Chem       Date:  2014-07-11       Impact factor: 5.275

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