Literature DB >> 30511672

Crystal structure of the dimethylsulfide monooxygenase DmoA from Hyphomicrobium sulfonivorans.

Hai Yan Cao1, Peng Wang1, Ming Peng1, Xuan Shao1, Xiu Lan Chen1, Chun Yang Li1.   

Abstract

DmoA is a monooxygenase which uses dioxygen (O2) and reduced flavin mononucleotide (FMNH2) to catalyze the oxidation of dimethylsulfide (DMS). Although it has been characterized, the structure of DmoA remains unknown. Here, the crystal structure of DmoA was determined to a resolution of 2.28 Å and was compared with those of its homologues LadA and BdsA. The results showed that their overall structures are similar: they all share a conserved TIM-barrel fold which is composed of eight α-helices and eight β-strands. In addition, they all have five additional insertions. Detailed comparison showed that the structures have notable differences despite their high sequence similarity. The substrate-binding pocket of DmoA is smaller compared with those of LadA and BdsA.

Entities:  

Keywords:  Hyphomicrobium sulfonivorans; TIM-barrel fold; dimethylsulfide monooxygenase; substrate-binding pocket; sulfur cycle

Mesh:

Substances:

Year:  2018        PMID: 30511672      PMCID: PMC6277965          DOI: 10.1107/S2053230X18015844

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


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