Literature DB >> 11193046

Microarray techniques in pathology: tool or toy?

A M Snijders1, G A Meijer, R H Brakenhoff, A J van den Brule, P J van Diest.   

Abstract

Microarray technology allows the simultaneous analysis of up to thousands of different genes in histological or cytological specimens. Although microarray technology has so far mainly been applied in the research setting, its clinical application in pathology is expected in the foreseeable future. This paper presents an overview of the technical "ins and outs" of microarray technology, and discusses several putative applications in diagnostic pathology, which include tumour classification, the prediction of responses to certain chemotherapeutical or hormonal agents, the biological staging of tumours, the risk assessment of premalignant lesions, and the detection of microorganisms.

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Year:  2000        PMID: 11193046      PMCID: PMC1186982          DOI: 10.1136/mp.53.6.289

Source DB:  PubMed          Journal:  Mol Pathol        ISSN: 1366-8714


  27 in total

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Journal:  Mol Pathol       Date:  2000-04

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Journal:  J Clin Pathol       Date:  1991-05       Impact factor: 3.411

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Review 5.  Bacterial transcript imaging by hybridization of total RNA to oligonucleotide arrays.

Authors:  A de Saizieu; U Certa; J Warrington; C Gray; W Keck; J Mous
Journal:  Nat Biotechnol       Date:  1998-01       Impact factor: 54.908

6.  Molecular classification of cancer: class discovery and class prediction by gene expression monitoring.

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Journal:  Science       Date:  1999-10-15       Impact factor: 47.728

Review 7.  Diagnostic and prognostic implications of the unfolding molecular biology of bone and soft tissue tumours.

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Journal:  J Clin Pathol       Date:  1999-07       Impact factor: 3.411

8.  Detection of heterozygous mutations in BRCA1 using high density oligonucleotide arrays and two-colour fluorescence analysis.

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Journal:  Nat Genet       Date:  1996-12       Impact factor: 38.330

9.  Comparative genomic hybridization for molecular cytogenetic analysis of solid tumors.

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Journal:  Science       Date:  1992-10-30       Impact factor: 47.728

10.  Cystic fibrosis mutation detection by hybridization to light-generated DNA probe arrays.

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Journal:  Hum Mutat       Date:  1996       Impact factor: 4.878

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  12 in total

1.  Expression profiling of human tumors: the end of surgical pathology?

Authors:  M Ladanyi; W C Chan; T J Triche; W L Gerald
Journal:  J Mol Diagn       Date:  2001-08       Impact factor: 5.568

2.  Mass spectrometry reveals specific and global molecular transformations during viral infection.

Authors:  Eden P Go; William R Wikoff; Zhouxin Shen; Grace O'Maille; Hirotoshi Morita; Thomas P Conrads; Anders Nordstrom; Sunia A Trauger; Wilasinee Uritboonthai; David A Lucas; King C Chan; Timothy D Veenstra; Hanna Lewicki; Michael B Oldstone; Anette Schneemann; Gary Siuzdak
Journal:  J Proteome Res       Date:  2006-09       Impact factor: 4.466

Review 3.  Embryonic reversions and lineage infidelities in tumour cells: genome-based models and role of genetic instability.

Authors:  Leon P Bignold
Journal:  Int J Exp Pathol       Date:  2005-04       Impact factor: 1.925

4.  Over-expression of fibroblast growth factor receptor 3 in human hepatocellular carcinoma.

Authors:  Wei-Hua Qiu; Bing-Sen Zhou; Peiguo-G Chu; Wen-Gang Chen; Christopher Chung; Jennifer Shih; Paul Hwu; Christopher Yeh; Richard Lopez; Yun Yen
Journal:  World J Gastroenterol       Date:  2005-09-14       Impact factor: 5.742

5.  High quality RNA isolation from tumours with low cellularity and high extracellular matrix component for cDNA microarrays: application to chondrosarcoma.

Authors:  H J Baelde; A M Cleton-Jansen; H van Beerendonk; M Namba; J V Bovée; P C Hogendoorn
Journal:  J Clin Pathol       Date:  2001-10       Impact factor: 3.411

6.  cDNA arrays and immunohistochemistry identification of CD10/CALLA expression in hepatocellular carcinoma.

Authors:  S Y Xiao; H L Wang; J Hart; D Fleming; M R Beard
Journal:  Am J Pathol       Date:  2001-10       Impact factor: 4.307

7.  Down-regulation of growth arrest DNA damage-inducible gene 45beta expression is associated with human hepatocellular carcinoma.

Authors:  Weihua Qiu; Donald David; Bingsen Zhou; Peiguo G Chu; Bohe Zhang; Mengchao Wu; Jiacheng Xiao; Tianquan Han; Zhenggang Zhu; Tianxiang Wang; Xiyong Liu; Richard Lopez; Paul Frankel; Ambrose Jong; Yun Yen
Journal:  Am J Pathol       Date:  2003-06       Impact factor: 4.307

8.  Molecular evidence for putative tumour suppressor genes on chromosome 13q specific to BRCA1 related ovarian and fallopian tube cancer.

Authors:  A P M Jongsma; J M J Piek; R P Zweemer; R H M Verheijen; J W T Klein Gebbinck; G J van Kamp; I J Jacobs; P Shaw; P J van Diest; P Kenemans
Journal:  Mol Pathol       Date:  2002-10

Review 9.  Molecular pathology of adrenal cortical tumors: separating adenomas from carcinomas.

Authors:  Thomas J Giordano
Journal:  Endocr Pathol       Date:  2006       Impact factor: 4.056

10.  Functional genomics as a tool in virus research.

Authors:  Ruchi Ratra; Sunil K Lal
Journal:  Indian J Microbiol       Date:  2008-07-27       Impact factor: 2.461

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