Literature DB >> 11171990

Origin of nanomechanical cantilever motion generated from biomolecular interactions.

G Wu1, H Ji, K Hansen, T Thundat, R Datar, R Cote, M F Hagan, A K Chakraborty, A Majumdar.   

Abstract

Generation of nanomechanical cantilever motion from biomolecular interactions can have wide applications, ranging from high-throughput biomolecular detection to bioactuation. Although it has been suggested that such motion is caused by changes in surface stress of a cantilever beam, the origin of the surface-stress change has so far not been elucidated. By using DNA hybridization experiments, we show that the origin of motion lies in the interplay between changes in configurational entropy and intermolecular energetics induced by specific biomolecular interactions. By controlling entropy change during DNA hybridization, the direction of cantilever motion can be manipulated. These thermodynamic principles were also used to explain the origin of motion generated from protein-ligand binding.

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Year:  2001        PMID: 11171990      PMCID: PMC29296          DOI: 10.1073/pnas.98.4.1560

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  13 in total

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5.  Fluctuation driven ratchets: Molecular motors.

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6.  Overstretching B-DNA: the elastic response of individual double-stranded and single-stranded DNA molecules.

Authors:  S B Smith; Y Cui; C Bustamante
Journal:  Science       Date:  1996-02-09       Impact factor: 47.728

7.  Thermodynamics and kinetics of a Brownian motor.

Authors:  R D Astumian
Journal:  Science       Date:  1997-05-09       Impact factor: 47.728

8.  Ionic effects on the elasticity of single DNA molecules.

Authors:  C G Baumann; S B Smith; V A Bloomfield; C Bustamante
Journal:  Proc Natl Acad Sci U S A       Date:  1997-06-10       Impact factor: 11.205

9.  Direct observation of kinesin stepping by optical trapping interferometry.

Authors:  K Svoboda; C F Schmidt; B J Schnapp; S M Block
Journal:  Nature       Date:  1993-10-21       Impact factor: 49.962

10.  Single myosin molecule mechanics: piconewton forces and nanometre steps.

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Journal:  Nature       Date:  1994-03-10       Impact factor: 49.962

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  32 in total

1.  The effect of surface probe density on DNA hybridization.

Authors:  A W Peterson; R J Heaton; R M Georgiadis
Journal:  Nucleic Acids Res       Date:  2001-12-15       Impact factor: 16.971

2.  Multiple label-free biodetection and quantitative DNA-binding assays on a nanomechanical cantilever array.

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Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-15       Impact factor: 11.205

3.  Atomistic understanding of kinetic pathways for single base-pair binding and unbinding in DNA.

Authors:  Michael F Hagan; Aaron R Dinner; David Chandler; Arup K Chakraborty
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-14       Impact factor: 11.205

Review 4.  Artificial Molecular Machines.

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5.  Biosensors: Microcantilevers to lift biomolecules.

Authors:  Gajendra S Shekhawat; Vinayak P Dravid
Journal:  Nat Nanotechnol       Date:  2015-08-17       Impact factor: 39.213

6.  A label-free immunosensor array using single-chain antibody fragments.

Authors:  Natalija Backmann; Christian Zahnd; Francois Huber; Alexander Bietsch; Andreas Plückthun; Hans-Peter Lang; Hans-Joachim Güntherodt; Martin Hegner; Christoph Gerber
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-28       Impact factor: 11.205

7.  Differential force microscope for long time-scale biophysical measurements.

Authors:  Jason L Choy; Sapun H Parekh; Ovijit Chaudhuri; Allen P Liu; Carlos Bustamante; Matthew J Footer; Julie A Theriot; Daniel A Fletcher
Journal:  Rev Sci Instrum       Date:  2007-04       Impact factor: 1.523

8.  Correlation of embryonic skeletal muscle myotube physical characteristics with contractile force generation on an atomic force microscope-based bio-microelectromechanical systems device.

Authors:  K L Pirozzi; C J Long; C W McAleer; A S T Smith; J J Hickman
Journal:  Appl Phys Lett       Date:  2013-08-20       Impact factor: 3.791

9.  Nanomechanical sensors: Bent on detecting cancer.

Authors:  Gajendra S Shekhawat; Vinayak P Dravid
Journal:  Nat Nanotechnol       Date:  2013-02       Impact factor: 39.213

Review 10.  Experimental and computational characterization of biological liquid crystals: a review of single-molecule bioassays.

Authors:  Kilho Eom; Jaemoon Yang; Jinsung Park; Gwonchan Yoon; Young Soo Sohn; Shinsuk Park; Dae Sung Yoon; Sungsoo Na; Taeyun Kwon
Journal:  Int J Mol Sci       Date:  2009-09-10       Impact factor: 6.208

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