Literature DB >> 11168416

Major tyrosine identity determinants in Methanococcus jannaschii and Saccharomyces cerevisiae tRNA(Tyr) are conserved but expressed differently.

P Fechter1, J Rudinger-Thirion, M Tukalo, R Giegé.   

Abstract

Using in vitro tRNA transcripts and minihelices it was shown that the tyrosine identity for tRNA charging by tyrosyl-tRNA synthetase (TyrRS) from the archaeon Methanococcus jannaschii is determined by six nucleotides: the discriminator base A73 and the first base-pair C1-G72 in the acceptor stem together with the anticodon triplet. The anticodon residues however, participate only weakly in identity determination, especially residues 35 and 36. The completeness of the aforementioned identity set was verified by its tranfer into several tRNAs which then become as efficiently tyrosylatable as the wild-type transcript from M. jannaschii. Temperature dependence experiments on both the structure and the tyrosylation properties of M. jannaschii and yeast tRNA(Tyr) transcripts show that the archaeal transcript has greater structural stability and enhanced aminoacylation behaviour than the yeast transcript. Tyrosine identity in M. jannaschii is compared to that in yeast, and the conservation of the major determinant in both organisms, namely the C1-G72 pair, gives additional support to the existence of a functional connection between archaeal and eukaryotic aminoacylation systems.

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Year:  2001        PMID: 11168416     DOI: 10.1046/j.1432-1327.2001.01931.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  15 in total

1.  Improved Incorporation of Noncanonical Amino Acids by an Engineered tRNA(Tyr) Suppressor.

Authors:  Benjamin J Rauch; Joseph J Porter; Ryan A Mehl; John J Perona
Journal:  Biochemistry       Date:  2016-01-08       Impact factor: 3.162

2.  Overexpression, purification and crystallization of tyrosyl-tRNA synthetase from the hyperthermophilic archaeon Aeropyrum pernix K1.

Authors:  Jun Iwaki; Ryuichiro Suzuki; Zui Fujimoto; Mitsuru Momma; Atsushi Kuno; Tsunemi Hasegawa
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-10-25

Review 3.  How tRNAs dictate nuclear codon reassignments: Only a few can capture non-cognate codons.

Authors:  Martin Kollmar; Stefanie Mühlhausen
Journal:  RNA Biol       Date:  2017-01-17       Impact factor: 4.652

4.  Identifying the ligated amino acid of archaeal tRNAs based on positions outside the anticodon.

Authors:  Tal Galili; Hila Gingold; Shaul Shaul; Yoav Benjamini
Journal:  RNA       Date:  2016-08-11       Impact factor: 4.942

5.  Human mitochondrial TyrRS disobeys the tyrosine identity rules.

Authors:  Luc Bonnefond; Magali Frugier; Richard Giegé; Joëlle Rudinger-Thirion
Journal:  RNA       Date:  2005-05       Impact factor: 4.942

6.  Engineering aminoacyl-tRNA synthetases for use in synthetic biology.

Authors:  Natalie Krahn; Jeffery M Tharp; Ana Crnković; Dieter Söll
Journal:  Enzymes       Date:  2020-09-08

7.  Pyrrolysyl-tRNA synthetase, an aminoacyl-tRNA synthetase for genetic code expansion.

Authors:  Ana Crnković; Tateki Suzuki; Dieter Söll; Noah M Reynolds
Journal:  Croat Chem Acta       Date:  2016-06-14       Impact factor: 0.887

Review 8.  Pathways to disease from natural variations in human cytoplasmic tRNAs.

Authors:  Jeremy T Lant; Matthew D Berg; Ilka U Heinemann; Christopher J Brandl; Patrick O'Donoghue
Journal:  J Biol Chem       Date:  2019-01-14       Impact factor: 5.157

9.  Class I tyrosyl-tRNA synthetase has a class II mode of cognate tRNA recognition.

Authors:  Anna Yaremchuk; Ivan Kriklivyi; Michael Tukalo; Stephen Cusack
Journal:  EMBO J       Date:  2002-07-15       Impact factor: 11.598

Review 10.  Synthesis at the interface of chemistry and biology.

Authors:  Xu Wu; Peter G Schultz
Journal:  J Am Chem Soc       Date:  2009-09-09       Impact factor: 15.419

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