Literature DB >> 11154592

Structural origin of two paramagnetic species in six-coordinated nitrosoiron(II) porphyrins revealed by density functional theory analysis of the g tensors.

S Patchkovskii1, T Ziegler.   

Abstract

Potential energy and electron paramagnetic resonance (EPR) g tensor surfaces of model five- and six-coordinated porphyrins were examined. For both types of complexes, the NO ligand is preferably coordinated end-on, with a Fe-N-O bond angle of approximately 140 degrees. In the free five-coordinated structure, NO undergoes free rotation around the axial Fe-N(NO) bond. This motion is strongly coupled to the saddle-type distortion of the porphyrin ligand. Coordination by the second axial ligand (imidazole) raises the calculated barrier for NO rotation to about 1 kcal/mol, which is further increased by displacements of imidazole from the ideal axial position. The potential energy surface for the dissociation of the weakly coordinated imidazole ligand is exceptionally flat, with variation of the Fe-N(Im) bond length between 2.1 and 2.5 A changing the energy by less than 1 kcal/mol. Experimental orientations of both axial ligands, as well as the Fe-N(Im) bond length, are therefore likely to be determined by the environment of the complex. In contrast to the total energy, calculated EPR g-tensors are sensitive to the orientation of the NO ligand and to the Fe-N(Im) bond length. Contrary to a common assumption, the g tensor component closest to the free-electron value does not coincide with the direction of the Fe-N(NO) bond. From comparison of the calculated and experimental g-tensor components for a range of structures, the rhombic ("type I") EPR signal is assigned to a static structure with NO oriented toward the meso-C atom of the prophyrin ring, and RFe-N(Im) approximately 2.1 A (calcd g1 = 1.95, g2 = 2.00, g3 = 2.04; exptl g1 = 1.96-1.98, g2 = 2.00, g3 = 2.06-2.08). The axial ("type II") EPR signal cannot correspond to any of the static structures studied presently. It is tentatively assigned to a partially dissociated six-coordinated complex (RFe-N(Im) > 2.5 A), with a freely rotating NO ligand (calcd g parallel = 2.00, g perpendicular = 2.03; exptl g parallel = 1.99-2.00, g perpendicular = 2.02-2.03).

Entities:  

Year:  2000        PMID: 11154592     DOI: 10.1021/ic0005691

Source DB:  PubMed          Journal:  Inorg Chem        ISSN: 0020-1669            Impact factor:   5.165


  15 in total

1.  Pulsed ENDOR determination of the arginine location in the ferrous-NO form of neuronal NOS.

Authors:  Andrei V Astashkin; Bradley O Elmore; Li Chen; Weihong Fan; J Guy Guillemette; Changjian Feng
Journal:  J Phys Chem A       Date:  2012-06-15       Impact factor: 2.781

2.  Differential sensing of protein influences by NO and CO vibrations in heme adducts.

Authors:  Mohammed Ibrahim; Changliang Xu; Thomas G Spiro
Journal:  J Am Chem Soc       Date:  2006-12-27       Impact factor: 15.419

3.  Nuclear resonance vibrational spectroscopy applied to [Fe(OEP)(NO)]: the vibrational assignments of five-coordinate ferrous heme-nitrosyls and implications for electronic structure.

Authors:  Nicolai Lehnert; Mary Grace I Galinato; Florian Paulat; George B Richter-Addo; Wolfgang Sturhahn; Nan Xu; Jiyong Zhao
Journal:  Inorg Chem       Date:  2010-05-03       Impact factor: 5.165

4.  Probing the Hydrogen Bonding of the Ferrous-NO Heme Center of nNOS by Pulsed Electron Paramagnetic Resonance.

Authors:  Andrei V Astashkin; Li Chen; Bradley O Elmore; Deepak Kunwar; Yubin Miao; Huiying Li; Thomas L Poulos; Linda J Roman; Changjian Feng
Journal:  J Phys Chem A       Date:  2015-06-12       Impact factor: 2.781

5.  Oriented single-crystal nuclear resonance vibrational spectroscopy of [Fe(TPP)(MI)(NO)]: quantitative assessment of the trans effect of NO.

Authors:  Nicolai Lehnert; J Timothy Sage; Nathan Silvernail; W Robert Scheidt; E Ercan Alp; Wolfgang Sturhahn; Jiyong Zhao
Journal:  Inorg Chem       Date:  2010-08-02       Impact factor: 5.165

6.  Reductive activation of the heme iron-nitrosyl intermediate in the reaction mechanism of cytochrome c nitrite reductase: a theoretical study.

Authors:  Dmytro Bykov; Frank Neese
Journal:  J Biol Inorg Chem       Date:  2012-03-28       Impact factor: 3.358

7.  Predicting Nuclear Resonance Vibrational Spectra of [Fe(OEP)(NO)].

Authors:  Qian Peng; Jeffrey W Pavlik; W Robert Scheidt; Olaf Wiest
Journal:  J Chem Theory Comput       Date:  2011-11-29       Impact factor: 6.006

8.  Quantitative vibrational dynamics of iron in nitrosyl porphyrins.

Authors:  Bogdan M Leu; Marek Z Zgierski; Graeme R A Wyllie; W Robert Scheidt; Wolfgang Sturhahn; E Ercan Alp; Stephen M Durbin; J Timothy Sage
Journal:  J Am Chem Soc       Date:  2004-04-07       Impact factor: 15.419

9.  3D Motions of Iron in Six-Coordinate {FeNO}(7) Hemes by Nuclear Resonance Vibration Spectroscopy.

Authors:  Qian Peng; Jeffrey W Pavlik; Nathan J Silvernail; E Ercan Alp; Michael Y Hu; Jiyong Zhao; J Timothy Sage; W Robert Scheidt
Journal:  Chemistry       Date:  2016-03-21       Impact factor: 5.236

10.  Reversible NO motion in crystalline [Fe(Porph)(1-MeIm)(NO)] derivatives.

Authors:  Nathan J Silvernail; Jeffrey W Pavlik; Bruce C Noll; Charles E Schulz; W Robert Scheidt
Journal:  Inorg Chem       Date:  2008-01-04       Impact factor: 5.165

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