Literature DB >> 11053429

Orf135 from Escherichia coli Is a Nudix hydrolase specific for CTP, dCTP, and 5-methyl-dCTP.

S F O'Handley1, C A Dunn, M J Bessman.   

Abstract

Orf135 from Escherichia coli is a new member of the Nudix (nucleoside diphosphate linked to some other moiety, x) hydrolase family of enzymes with substrate specificity for CTP, dCTP, and 5-methyl-dCTP. The gene has been cloned for overexpression, and the protein has been overproduced, purified, and characterized. Orf135 is most active on 5-methyl-dCTP (k(cat)/K(m) = 301,000 M(-1) s(-1)), followed by CTP (k(cat)/K(m) = 47,000 M(-1) s(-1)) and dCTP (k(cat)/K(m) = 18,000 M(-1) s(-1)). Unlike other nucleoside triphosphate pyrophophohydrolases of the Nudix hydrolase family discovered thus far, Orf135 is highly specific for pyrimidine (deoxy)nucleoside triphosphates. Like other Nudix hydrolases, the enzyme cleaves its substrates to produce a nucleoside monophosphate and inorganic pyrophosphate, has an alkaline pH optimum, and requires a divalent metal cation for catalysis, with magnesium yielding optimal activity. Because of the nature of its substrate specificity, Orf135 may play a role in pyrimidine biosynthesis, lipid biosynthesis, and in controlling levels of 5-methyl-dCTP in the cell.

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Year:  2000        PMID: 11053429     DOI: 10.1074/jbc.M004100200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  16 in total

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2.  The deoxycytidine pathway for thymidylate synthesis in Escherichia coli.

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Journal:  EMBO J       Date:  2002-12-16       Impact factor: 11.598

4.  A cryptic activity in the Nudix hydrolase superfamily.

Authors:  Maurice J Bessman
Journal:  Protein Sci       Date:  2019-06-24       Impact factor: 6.725

5.  Systematic characterization of the ADP-ribose pyrophosphatase family in the Cyanobacterium Synechocystis sp. strain PCC 6803.

Authors:  Kenji Okuda; Hidenori Hayashi; Yoshitaka Nishiyama
Journal:  J Bacteriol       Date:  2005-07       Impact factor: 3.490

6.  YZGD from Paenibacillus thiaminolyticus, a pyridoxal phosphatase of the HAD (haloacid dehalogenase) superfamily and a versatile member of the Nudix (nucleoside diphosphate x) hydrolase superfamily.

Authors:  Isaac M Tirrell; Jennifer L Wall; Christopher J Daley; Sarah J Denial; Frances G Tennis; Kevin G Galens; Suzanne F O'Handley
Journal:  Biochem J       Date:  2006-03-15       Impact factor: 3.857

7.  Overexpression, crystallization and preliminary X-ray crystallographic analysis of Nudix hydrolase Orf141 from Escherichia coli K-1.

Authors:  Junho Jung; Yeh-Jin Ahn; Lin-Woo Kang
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-08-31

8.  Gene ytkD of Bacillus subtilis encodes an atypical nucleoside triphosphatase member of the Nudix hydrolase superfamily.

Authors:  Wenlian Xu; Candice R Jones; Christopher A Dunn; Maurice J Bessman
Journal:  J Bacteriol       Date:  2004-12       Impact factor: 3.490

9.  Biochemical properties of MutT2 proteins from Mycobacterium tuberculosis and M. smegmatis and their contrasting antimutator roles in Escherichia coli.

Authors:  Pau Biak Sang; Umesh Varshney
Journal:  J Bacteriol       Date:  2013-01-25       Impact factor: 3.490

10.  The ytkD (mutTA) gene of Bacillus subtilis encodes a functional antimutator 8-Oxo-(dGTP/GTP)ase and is under dual control of sigma A and sigma F RNA polymerases.

Authors:  Martha I Ramírez; Francisco X Castellanos-Juárez; Ronald E Yasbin; Mario Pedraza-Reyes
Journal:  J Bacteriol       Date:  2004-02       Impact factor: 3.490

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