Literature DB >> 11013398

Confirmation of a unique intra-dimer cooperativity in the human hemoglobin alpha(1)beta(1)half-oxygenated intermediate supports the symmetry rule model of allosteric regulation.

G K Ackers1, J M Holt, Y Huang, Y Grinkova, A L Klinger, I Denisov.   

Abstract

The contribution of the alpha(1)beta(1)half-oxygenated tetramer [alphabeta:alphaO(2)betaO(2)] (species 21) to human hemoglobin cooperativity was evaluated using cryogenic isoelectric focusing. The cooperative free energy of binding, reflecting O(2)-driven protein structure changes, was measured as (21)DeltaG(c) = 5.1 +/- 0. 3 kcal for the Zn/FeO(2) analog. For the Fe/FeCN analog, (21)DeltaG(c) was estimated as 4.0 kcal after correction for a CN ligand rearrangement artifact, demonstrating that ligand rearrangement does not invalidate previous conclusions regarding this species. In the context of the entire Hb cooperativity cascade, which includes eight intermediate species, the 21 tetramer is highly abundant relative to the other doubly-ligated species, providing strong support for the previously determined consensus partition function of O(2) binding and for the Symmetry Rule model of hemoglobin cooperativity (Ackers et al., Science 1992;255:54-63). Cooperativity of normal human hemoglobin is shown to depend on site-configuration, and not solely the number of O(2) bound, nor the occupancy of alpha vs. beta subunits. Verification of a unique contribution from the alpha(1)beta(1)doubly-oxygenated species to the equilibrium O(2) binding curve strongly reinforces the Symmetry Rule interpretation that the alpha(1)beta(1)dimer acts both as a structural and functional element in cooperative O(2) binding.

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Year:  2000        PMID: 11013398     DOI: 10.1002/1097-0134(2000)41:4+<23::aid-prot30>3.0.co;2-d

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  13 in total

1.  Energetics by NMR: site-specific binding in a positively cooperative system.

Authors:  Gregory P Tochtrop; Klaus Richter; Changguo Tang; James J Toner; Douglas F Covey; David P Cistola
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-19       Impact factor: 11.205

2.  High and low oxygen affinity conformations of T state hemoglobin.

Authors:  S Bruno; M Bonaccio; S Bettati; C Rivetti; C Viappiani; S Abbruzzetti; A Mozzarelli
Journal:  Protein Sci       Date:  2001-11       Impact factor: 6.725

3.  Single residue modification of only one dimer within the hemoglobin tetramer reveals autonomous dimer function.

Authors:  Gary K Ackers; Paula M Dalessio; George H Lew; Margaret A Daugherty; Jo M Holt
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-15       Impact factor: 11.205

4.  Modulation of reactivity and conformation within the T-quaternary state of human hemoglobin: the combined use of mutagenesis and sol-gel encapsulation.

Authors:  Uri Samuni; Camille J Roche; David Dantsker; Laura J Juszczak; Joel M Friedman
Journal:  Biochemistry       Date:  2006-03-07       Impact factor: 3.162

5.  Temperature dependent soret spectral band shifts accompany human CN-mesohemoglobin assembly.

Authors:  Priyani V Fonseka; Gayathri Vasudevan; Lisa-Jo Ann Clarizia; Melisenda J McDonald
Journal:  Protein J       Date:  2007-06       Impact factor: 2.371

6.  A signature of the T ---> R transition in human hemoglobin.

Authors:  M R Mihailescu; I M Russu
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-20       Impact factor: 11.205

7.  Phenylalanine fluorescence studies of calcium binding to N-domain fragments of Paramecium calmodulin mutants show increased calcium affinity correlates with increased disorder.

Authors:  W S VanScyoc; M A Shea
Journal:  Protein Sci       Date:  2001-09       Impact factor: 6.725

8.  Linking conformation change to hemoglobin activation via chain-selective time-resolved resonance Raman spectroscopy of protoheme/mesoheme hybrids.

Authors:  Gurusamy Balakrishnan; Mohammed Ibrahim; Piotr J Mak; Jessica Hata; James R Kincaid; Thomas G Spiro
Journal:  J Biol Inorg Chem       Date:  2009-03-14       Impact factor: 3.358

Review 9.  Protein dynamics from time resolved UV Raman spectroscopy.

Authors:  Gurusamy Balakrishnan; Colin L Weeks; Mohammed Ibrahim; Alexandra V Soldatova; Thomas G Spiro
Journal:  Curr Opin Struct Biol       Date:  2008-07-19       Impact factor: 6.809

10.  Subunit-selective interrogation of CO recombination in carbonmonoxy hemoglobin by isotope-edited time-resolved resonance Raman spectroscopy.

Authors:  Gurusamy Balakrishnan; Xiaojie Zhao; Edyta Podstawska; Leonard M Proniewicz; James R Kincaid; Thomas G Spiro
Journal:  Biochemistry       Date:  2009-04-14       Impact factor: 3.162

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