Literature DB >> 10996370

Spike sorting based on discrete wavelet transform coefficients.

J C Letelier1, P P Weber.   

Abstract

Using the novel mathematical technique known as wavelet analysis, a new method (WSC) is presented to sort spikes according to a decomposition of neural signals in the time-frequency space. The WSC method is implemented by a pyramidal algorithm that acts upon neural signals as a bank of quadrature mirror filters. This algorithm is clearly explained and an overview of the mathematical background of wavelet analysis is given. An artificial spike train, especially designed to test the specificity and sensibility of sorting procedures, was used to assess the performance of the WSC method as well as of methods based on principal component analysis (PCA) and reduced feature set (RFS). The WSC method outperformed the other two methods. Its superior performance was largely due to the fact that spike profiles that could not be separated by previous methods (because of the similarity of their temporal profile and the masking action of noise) were separable by the WSC method. The WSC method is particularly noise resistant, as it implicitly eliminates the irrelevant information contained in the noise frequency range. But the main advantage of the WSC method is its use of parameters that describe the joint time-frequency localization of spike features to build a fast and unspecialized pattern recognition procedure.

Mesh:

Year:  2000        PMID: 10996370     DOI: 10.1016/s0165-0270(00)00250-8

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  24 in total

Review 1.  Recent progress in multi-electrode spike sorting methods.

Authors:  Baptiste Lefebvre; Pierre Yger; Olivier Marre
Journal:  J Physiol Paris       Date:  2017-03-02

2.  Automated spike sorting using density grid contour clustering and subtractive waveform decomposition.

Authors:  Carlos Vargas-Irwin; John P Donoghue
Journal:  J Neurosci Methods       Date:  2007-04-12       Impact factor: 2.390

3.  Spike sorting by a minimax reduced feature set based on finite differences.

Authors:  Chien-Chang Yen; Wei-Chang Shann; Chen-Tung Yen; Meng-Li Tsai
Journal:  J Physiol Sci       Date:  2008-12-25       Impact factor: 2.781

4.  Traditional waveform based spike sorting yields biased rate code estimates.

Authors:  Valérie Ventura
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-16       Impact factor: 11.205

5.  Functional coupling from simple to complex cells in the visually driven cortical circuit.

Authors:  Jianing Yu; David Ferster
Journal:  J Neurosci       Date:  2013-11-27       Impact factor: 6.167

6.  Wavelet filtering before spike detection preserves waveform shape and enhances single-unit discrimination.

Authors:  Alexander B Wiltschko; Gregory J Gage; Joshua D Berke
Journal:  J Neurosci Methods       Date:  2008-05-28       Impact factor: 2.390

7.  Minimum requirements for accurate and efficient real-time on-chip spike sorting.

Authors:  Joaquin Navajas; Deren Y Barsakcioglu; Amir Eftekhar; Andrew Jackson; Timothy G Constandinou; Rodrigo Quian Quiroga
Journal:  J Neurosci Methods       Date:  2014-04-24       Impact factor: 2.390

8.  Changes in surface EMG assessed by discrete wavelet transform during maximal isometric voluntary contractions following supramaximal cycling.

Authors:  Luis Peñailillo; Rony Silvestre; Kazunori Nosaka
Journal:  Eur J Appl Physiol       Date:  2012-09-23       Impact factor: 3.078

9.  Spike sorting of synchronous spikes from local neuron ensembles.

Authors:  Felix Franke; Robert Pröpper; Henrik Alle; Philipp Meier; Jörg R P Geiger; Klaus Obermayer; Matthias H J Munk
Journal:  J Neurophysiol       Date:  2015-08-19       Impact factor: 2.714

10.  Massively Parallel Signal Processing using the Graphics Processing Unit for Real-Time Brain-Computer Interface Feature Extraction.

Authors:  J Adam Wilson; Justin C Williams
Journal:  Front Neuroeng       Date:  2009-07-14
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