Literature DB >> 10990462

Activation of the beta globin locus by transcription factors and chromatin modifiers.

T McMorrow1, A van den Wijngaard, A Wollenschlaeger, M van de Corput, K Monkhorst, T Trimborn, P Fraser, M van Lohuizen, T Jenuwein, M Djabali, S Philipsen, F Grosveld, E Milot.   

Abstract

Locus control regions (LCRs) alleviate chromatin-mediated transcriptional repression. Incomplete LCRs partially lose this property when integrated in transcriptionally restrictive genomic regions such as centromeres. This frequently results in position effect variegation (PEV), i.e. the suppression of expression in a proportion of the cells. Here we show that this PEV is influenced by the heterochromatic protein SUV39H1 and by the Polycomb group proteins M33 and BMI-1. A concentration variation of these proteins modulates the proportion of cells expressing human globins in a locus-dependent manner. Similarly, the transcription factors Sp1 or erythroid Krüppel-like factor (EKLF) also influence PEV, characterized by a change in the number of expressing cells and the chromatin structure of the locus. However, in contrast to results obtained in a euchromatic locus, EKLF influences the expression of the gamma- more than the beta-globin genes, suggesting that the relief of silencing is caused by the binding of EKLF to the LCR and that genes at an LCR proximal position are more likely to be in an open chromatin state than genes at a distal position.

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Year:  2000        PMID: 10990462      PMCID: PMC314215          DOI: 10.1093/emboj/19.18.4986

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  54 in total

Review 1.  Activation by locus control regions?

Authors:  F Grosveld
Journal:  Curr Opin Genet Dev       Date:  1999-04       Impact factor: 5.578

2.  The effect of distance on long-range chromatin interactions.

Authors:  N Dillon; T Trimborn; J Strouboulis; P Fraser; F Grosveld
Journal:  Mol Cell       Date:  1997-12       Impact factor: 17.970

3.  Altered DNA-binding specificity mutants of EKLF and Sp1 show that EKLF is an activator of the beta-globin locus control region in vivo.

Authors:  N Gillemans; R Tewari; F Lindeboom; R Rottier; T de Wit; M Wijgerde; F Grosveld; S Philipsen
Journal:  Genes Dev       Date:  1998-09-15       Impact factor: 11.361

Review 4.  Locus control regions: overcoming heterochromatin-induced gene inactivation in mammals.

Authors:  D Kioussis; R Festenstein
Journal:  Curr Opin Genet Dev       Date:  1997-10       Impact factor: 5.578

5.  Association of transcriptionally silent genes with Ikaros complexes at centromeric heterochromatin.

Authors:  K E Brown; S S Guest; S T Smale; K Hahm; M Merkenschlager; A G Fisher
Journal:  Cell       Date:  1997-12-12       Impact factor: 41.582

Review 6.  Functional analysis of mouse Polycomb group genes.

Authors:  M van Lohuizen
Journal:  Cell Mol Life Sci       Date:  1998-01       Impact factor: 9.261

7.  Enhancer of Polycomb is a suppressor of position-effect variegation in Drosophila melanogaster.

Authors:  D A Sinclair; N J Clegg; J Antonchuk; T A Milne; K Stankunas; C Ruse; T A Grigliatti; J A Kassis; H W Brock
Journal:  Genetics       Date:  1998-01       Impact factor: 4.562

8.  Position effects in mice carrying a lacZ transgene in cis with the beta-globin LCR can be explained by a graded model.

Authors:  L G Guy; R Kothary; L Wall
Journal:  Nucleic Acids Res       Date:  1997-11-01       Impact factor: 16.971

9.  Chromatin, TAFs, and a novel multiprotein coactivator are required for synergistic activation by Sp1 and SREBP-1a in vitro.

Authors:  A M Näär; P A Beaurang; K M Robinson; J D Oliner; D Avizonis; S Scheek; J Zwicker; J T Kadonaga; R Tjian
Journal:  Genes Dev       Date:  1998-10-01       Impact factor: 11.361

10.  The human polycomb group complex associates with pericentromeric heterochromatin to form a novel nuclear domain.

Authors:  A J Saurin; C Shiels; J Williamson; D P Satijn; A P Otte; D Sheer; P S Freemont
Journal:  J Cell Biol       Date:  1998-08-24       Impact factor: 10.539

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  13 in total

1.  Binding of Ikaros to the lambda5 promoter silences transcription through a mechanism that does not require heterochromatin formation.

Authors:  P Sabbattini; M Lundgren; A Georgiou; C Chow ; G Warnes; N Dillon
Journal:  EMBO J       Date:  2001-06-01       Impact factor: 11.598

2.  Multiple interactions between regulatory regions are required to stabilize an active chromatin hub.

Authors:  George P Patrinos; Mariken de Krom; Ernie de Boer; An Langeveld; A M Ali Imam; John Strouboulis; Wouter de Laat; Frank G Grosveld
Journal:  Genes Dev       Date:  2004-06-15       Impact factor: 11.361

3.  The human beta-globin locus control region can silence as well as activate gene expression.

Authors:  Yong-Qing Feng; Renaud Warin; Taihao Li; Emmanuel Olivier; Arnaud Besse; Amanda Lobell; Haiqing Fu; Chii Mei Lin; Mirit I Aladjem; Eric E Bouhassira
Journal:  Mol Cell Biol       Date:  2005-05       Impact factor: 4.272

4.  Multiple effects of genetic background on variegated transgene expression in mice.

Authors:  Margaret L Opsahl; Margaret McClenaghan; Anthea Springbett; Sarah Reid; Richard Lathe; Alan Colman; C Bruce A Whitelaw
Journal:  Genetics       Date:  2002-03       Impact factor: 4.562

5.  The binding of the ubiquitous transcription factor Sp1 at the locus control region represses the expression of beta-like globin genes.

Authors:  Dongxiao Feng; Yuet Wai Kan
Journal:  Proc Natl Acad Sci U S A       Date:  2005-07-05       Impact factor: 11.205

6.  Subcellular transport of EKLF and switch-on of murine adult beta maj globin gene transcription.

Authors:  Yu-Chiau Shyu; Tung-Liang Lee; Shau-Ching Wen; Hsin Chen; Wei-Yuan Hsiao; Xin Chen; JauLang Hwang; Che-Kun James Shen
Journal:  Mol Cell Biol       Date:  2007-01-22       Impact factor: 4.272

7.  Distinct domains of erythroid Krüppel-like factor modulate chromatin remodeling and transactivation at the endogenous beta-globin gene promoter.

Authors:  R Clark Brown; Scott Pattison; Janine van Ree; Elise Coghill; Andrew Perkins; Stephen M Jane; John M Cunningham
Journal:  Mol Cell Biol       Date:  2002-01       Impact factor: 4.272

8.  Site-specific acetylation by p300 or CREB binding protein regulates erythroid Krüppel-like factor transcriptional activity via its interaction with the SWI-SNF complex.

Authors:  W Zhang; S Kadam; B M Emerson; J J Bieker
Journal:  Mol Cell Biol       Date:  2001-04       Impact factor: 4.272

9.  Alterations in expression and chromatin configuration of the alpha hemoglobin-stabilizing protein gene in erythroid Kruppel-like factor-deficient mice.

Authors:  Andre M Pilon; Douglas G Nilson; Dewang Zhou; Jose Sangerman; Tim M Townes; David M Bodine; Patrick G Gallagher
Journal:  Mol Cell Biol       Date:  2006-06       Impact factor: 4.272

10.  Differential requirement of a distal regulatory region for pre-initiation complex formation at globin gene promoters.

Authors:  Julie Ross; Stefania Bottardi; Vincent Bourgoin; Alex Wollenschlaeger; Elliot Drobetsky; Marie Trudel; Eric Milot
Journal:  Nucleic Acids Res       Date:  2009-06-30       Impact factor: 16.971

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