Literature DB >> 11739731

Distinct domains of erythroid Krüppel-like factor modulate chromatin remodeling and transactivation at the endogenous beta-globin gene promoter.

R Clark Brown1, Scott Pattison, Janine van Ree, Elise Coghill, Andrew Perkins, Stephen M Jane, John M Cunningham.   

Abstract

Characterization of the mechanism(s) of action of trans-acting factors in higher eukaryotes requires the establishment of cellular models that test their function at endogenous target gene regulatory elements. Erythroid Krüppel-like factor (EKLF) is essential for beta-globin gene transcription. To elucidate the in vivo determinants leading to transcription of the adult beta-globin gene, functional domains of EKLF were examined in the context of chromatin remodeling and transcriptional activation at the endogenous locus. Human EKLF (hEKLF) sequences, linked to an estrogen-responsive domain, were studied with an erythroblast cell line lacking endogenous EKLF expression (J2eDeltaeklf). J2eDeltaeklf cells transduced with hEKLF demonstrated a dose-dependent rescue of beta-globin transcription in the presence of inducing ligand. Further analysis using a series of amino-terminal truncation mutants of hEKLF identified a distinct internal domain, which is sufficient for transactivation. Interestingly, studies of the chromatin structure of the beta-promoter revealed that a smaller carboxy-terminal domain generated an open promoter configuration. In vitro and in vivo binding studies demonstrated that this region interacted with BRG1, a component of the SWI/SNF chromatin remodeling complex. However, further study revealed that BRG1 interacted with an even smaller domain of EKLF, suggesting that additional protein interactions are required for chromatin remodeling at the endogenous beta-promoter. Taken together, our findings support a stepwise process of chromatin remodeling and coactivator recruitment to the beta-globin promoter in vivo. The J2eDeltaeklf inducible hEKLF system will be a valuable tool for further characterizing the temporal series of events required for endogenous beta-globin gene transcription.

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Year:  2002        PMID: 11739731      PMCID: PMC134232          DOI: 10.1128/MCB.22.1.161-170.2002

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  75 in total

Review 1.  Promoter targeting and chromatin remodeling by the SWI/SNF complex.

Authors:  C L Peterson; J L Workman
Journal:  Curr Opin Genet Dev       Date:  2000-04       Impact factor: 5.578

Review 2.  Looping, linking, and chromatin activity: new insights into beta-globin locus regulation.

Authors:  J D Engel; K Tanimoto
Journal:  Cell       Date:  2000-03-03       Impact factor: 41.582

Review 3.  ATP-dependent chromatin-remodeling complexes.

Authors:  M Vignali; A H Hassan; K E Neely; J L Workman
Journal:  Mol Cell Biol       Date:  2000-03       Impact factor: 4.272

4.  A C/EBP beta isoform recruits the SWI/SNF complex to activate myeloid genes.

Authors:  E Kowenz-Leutz; A Leutz
Journal:  Mol Cell       Date:  1999-11       Impact factor: 17.970

Review 5.  Remodeling chromatin structures for transcription: what happens to the histones?

Authors:  D J Steger; J L Workman
Journal:  Bioessays       Date:  1996-11       Impact factor: 4.345

6.  Mammalian SWI-SNF complexes contribute to activation of the hsp70 gene.

Authors:  I L de La Serna; K A Carlson; D A Hill; C J Guidi; R O Stephenson; S Sif; R E Kingston; A N Imbalzano
Journal:  Mol Cell Biol       Date:  2000-04       Impact factor: 4.272

7.  The role of EKLF in human beta-globin gene competition.

Authors:  M Wijgerde; J Gribnau; T Trimborn; B Nuez; S Philipsen; F Grosveld; P Fraser
Journal:  Genes Dev       Date:  1996-11-15       Impact factor: 11.361

8.  Erythroid Krüppel-like factor (EKLF) contains a multifunctional transcriptional activation domain important for inter- and intramolecular interactions.

Authors:  X Chen; J J Bieker
Journal:  EMBO J       Date:  1996-11-01       Impact factor: 11.598

9.  Nucleosome mobility and the maintenance of nucleosome positioning.

Authors:  M J Pazin; P Bhargava; E P Geiduschek; J T Kadonaga
Journal:  Science       Date:  1997-05-02       Impact factor: 47.728

10.  The human erythroid-specific transcription factor EKLF localizes to chromosome 19p13.12-p13.13.

Authors:  J H van Ree; M A Roskrow; A M Becher; R McNall; V A Valentine; S M Jane; J M Cunningham
Journal:  Genomics       Date:  1997-02-01       Impact factor: 5.736

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  21 in total

1.  A global role for KLF1 in erythropoiesis revealed by ChIP-seq in primary erythroid cells.

Authors:  Michael R Tallack; Tom Whitington; Wai Shan Yuen; Elanor N Wainwright; Janelle R Keys; Brooke B Gardiner; Ehsan Nourbakhsh; Nicole Cloonan; Sean M Grimmond; Timothy L Bailey; Andrew C Perkins
Journal:  Genome Res       Date:  2010-05-27       Impact factor: 9.043

2.  Requirement for SWI/SNF chromatin-remodeling complex in Tat-mediated activation of the HIV-1 promoter.

Authors:  Céline Tréand; Isaure du Chéné; Vanessa Brès; Rosemary Kiernan; Richard Benarous; Monsef Benkirane; Stéphane Emiliani
Journal:  EMBO J       Date:  2006-04-06       Impact factor: 11.598

3.  Acetylation of EKLF is essential for epigenetic modification and transcriptional activation of the beta-globin locus.

Authors:  Tanushri Sengupta; Ken Chen; Eric Milot; James J Bieker
Journal:  Mol Cell Biol       Date:  2008-08-18       Impact factor: 4.272

4.  Structural and functional characterization of an atypical activation domain in erythroid Kruppel-like factor (EKLF).

Authors:  Caroline Mas; Mathieu Lussier-Price; Shefali Soni; Thomas Morse; Geneviève Arseneault; Paola Di Lello; Julien Lafrance-Vanasse; James J Bieker; James G Omichinski
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-13       Impact factor: 11.205

5.  Recruitment of the SWI/SNF protein Brg1 by a multiprotein complex effects transcriptional repression in murine erythroid progenitors.

Authors:  Zhixiong Xu; Xianzhang Meng; Ying Cai; Mark J Koury; Stephen J Brandt
Journal:  Biochem J       Date:  2006-10-15       Impact factor: 3.857

Review 6.  The multifunctional role of EKLF/KLF1 during erythropoiesis.

Authors:  Miroslawa Siatecka; James J Bieker
Journal:  Blood       Date:  2011-05-25       Impact factor: 22.113

7.  Chromatin domain activation via GATA-1 utilization of a small subset of dispersed GATA motifs within a broad chromosomal region.

Authors:  Hogune Im; Jeffrey A Grass; Kirby D Johnson; Shin-Il Kim; Meghan E Boyer; Anthony N Imbalzano; James J Bieker; Emery H Bresnick
Journal:  Proc Natl Acad Sci U S A       Date:  2005-11-14       Impact factor: 11.205

Review 8.  EKLF/KLF1, a tissue-restricted integrator of transcriptional control, chromatin remodeling, and lineage determination.

Authors:  Yvette Y Yien; James J Bieker
Journal:  Mol Cell Biol       Date:  2012-10-22       Impact factor: 4.272

9.  Failure of terminal erythroid differentiation in EKLF-deficient mice is associated with cell cycle perturbation and reduced expression of E2F2.

Authors:  Andre M Pilon; Murat O Arcasoy; Holly K Dressman; Serena E Vayda; Yelena D Maksimova; Jose I Sangerman; Patrick G Gallagher; David M Bodine
Journal:  Mol Cell Biol       Date:  2008-10-13       Impact factor: 4.272

10.  BRG1 directly regulates nucleosome structure and chromatin looping of the alpha globin locus to activate transcription.

Authors:  Shin-Il Kim; Emery H Bresnick; Scott J Bultman
Journal:  Nucleic Acids Res       Date:  2009-08-20       Impact factor: 16.971

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