Literature DB >> 10970837

Genome-wide variation of the somatic mutation frequency in transgenic plants.

I Kovalchuk1, O Kovalchuk, B Hohn.   

Abstract

In order to analyse the frequency of point mutations in whole plants, several constructs containing single nonsense mutations in the beta-glucuronidase (uidA) gene were used to generate transgenic Arabidopsis thaliana plants. Upon histochemical staining of transgenic plants, sectors indicative of transgene reactivation appeared. Reversion frequencies were in the range of 10(-7)-10(-8) events per base pair, exceeding the previous estimates for other eukaryotes at least 100-fold. The frequency was dependent on the position of the mutation substrate within the transgene and the position of the transgene within the Arabidopsis genome. An inverse relationship between the level of transgene transcription and mutation frequency was observed in single-copy lines. DNA-damaging factors induced the mutation frequency by a factor of up to 56 for UV-C, a factor of 3 for X-rays and a factor of 2 for methyl methanesulfonate. This novel plant mutation-monitoring system allowed us to measure the frequencies of point mutation in whole plants and may be used as an alternative or complement to study the mutagenicity of different environmental factors on the higher eukaryote's genome.

Entities:  

Mesh:

Substances:

Year:  2000        PMID: 10970837      PMCID: PMC302052          DOI: 10.1093/emboj/19.17.4431

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  30 in total

1.  Transgenic zebrafish for detecting mutations caused by compounds in aquatic environments.

Authors:  K Amanuma; H Takeda; H Amanuma; Y Aoki
Journal:  Nat Biotechnol       Date:  2000-01       Impact factor: 54.908

2.  Spontaneous deleterious mutation in Arabidopsis thaliana.

Authors:  S T Schultz; M Lynch; J H Willis
Journal:  Proc Natl Acad Sci U S A       Date:  1999-09-28       Impact factor: 11.205

3.  Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs.

Authors:  K H Wolfe; W H Li; P M Sharp
Journal:  Proc Natl Acad Sci U S A       Date:  1987-12       Impact factor: 11.205

4.  Molecular basis of base substitution hotspots in Escherichia coli.

Authors:  C Coulondre; J H Miller; P J Farabaugh; W Gilbert
Journal:  Nature       Date:  1978-08-24       Impact factor: 49.962

Review 5.  O-alkyl pyrimidines in mutagenesis and carcinogenesis: occurrence and significance.

Authors:  B Singer
Journal:  Cancer Res       Date:  1986-10       Impact factor: 12.701

Review 6.  A review of some topics concerning mutagenesis by ultraviolet light.

Authors:  F Hutchinson
Journal:  Photochem Photobiol       Date:  1987-06       Impact factor: 3.421

7.  Mutation rates differ among regions of the mammalian genome.

Authors:  K H Wolfe; P M Sharp; W H Li
Journal:  Nature       Date:  1989-01-19       Impact factor: 49.962

8.  Methylation of the O6 position of guanine in DNA is the most likely initiating event in carcinogenesis by methylating agents.

Authors:  A E Pegg
Journal:  Cancer Invest       Date:  1984       Impact factor: 2.176

9.  Mutagenic and chromosome-breaking effects of azide in barley and human leukocytes.

Authors:  C Sander; R A Nilan; A Kleinhofs; B K Vig
Journal:  Mutat Res       Date:  1978-04       Impact factor: 2.433

10.  One pyrimidine dimer inactivates expression of a transfected gene in xeroderma pigmentosum cells.

Authors:  M Protić-Sabljić; K H Kraemer
Journal:  Proc Natl Acad Sci U S A       Date:  1985-10       Impact factor: 11.205

View more
  40 in total

1.  Male-biased transmission of deleterious mutations to the progeny in Arabidopsis thaliana.

Authors:  Carrie-Ann Whittle; Mark O Johnston
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-24       Impact factor: 11.205

2.  Molecular aspects of plant adaptation to life in the Chernobyl zone.

Authors:  Igor Kovalchuk; Vladimir Abramov; Igor Pogribny; Olga Kovalchuk
Journal:  Plant Physiol       Date:  2004-05-07       Impact factor: 8.340

3.  Fluorescence-microscopy screening and next-generation sequencing: useful tools for the identification of genes involved in organelle integrity.

Authors:  Giovanni Stefano; Luciana Renna; Federica Brandizzi
Journal:  J Vis Exp       Date:  2012-04-13       Impact factor: 1.355

4.  Role of AtPolζ, AtRev1, and AtPolη in UV light-induced mutagenesis in Arabidopsis.

Authors:  Mayu Nakagawa; Shinya Takahashi; Atsushi Tanaka; Issay Narumi; Ayako N Sakamoto
Journal:  Plant Physiol       Date:  2010-10-28       Impact factor: 8.340

5.  The effect of sequence divergence on recombination between direct repeats in Arabidopsis.

Authors:  Roy Opperman; Eyal Emmanuel; Avraham A Levy
Journal:  Genetics       Date:  2004-12       Impact factor: 4.562

6.  Involvement of the Arabidopsis thaliana AtPMS1 gene in somatic repeat instability.

Authors:  Abdourahamane H Alou; A Azaiez; M Jean; Francois J Belzile
Journal:  Plant Mol Biol       Date:  2004-10       Impact factor: 4.076

7.  Reduction of stability of arabidopsis genomic and transgenic DNA-repeat sequences (microsatellites) by inactivation of AtMSH2 mismatch-repair function.

Authors:  Jeffrey M Leonard; Stephanie R Bollmann; John B Hays
Journal:  Plant Physiol       Date:  2003-09       Impact factor: 8.340

8.  Genome stability in the uvh6 mutant of Arabidopsis thaliana.

Authors:  Andriy Bilichak; Youli Yao; Viktor Titov; Andrey Golubov; Igor Kovalchuk
Journal:  Plant Cell Rep       Date:  2014-02-20       Impact factor: 4.570

9.  Transgenerational changes in plant physiology and in transposon expression in response to UV-C stress in Arabidopsis thaliana.

Authors:  Zoe Migicovsky; Igor Kovalchuk
Journal:  Plant Signal Behav       Date:  2014

10.  AtREV1, a Y-family DNA polymerase in Arabidopsis, has deoxynucleotidyl transferase activity in vitro.

Authors:  Shinya Takahashi; Ayako N Sakamoto; Atsushi Tanaka; Kikuo Shimizu
Journal:  Plant Physiol       Date:  2007-09-07       Impact factor: 8.340

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.