Literature DB >> 10922054

Hydrolytic editing by a class II aminoacyl-tRNA synthetase.

P J Beuning1, K Musier-Forsyth.   

Abstract

Editing reactions catalyzed by aminoacyl-tRNA synthetases are critical for accurate translation of the genetic code. To date, this activity, whereby misactivated amino acids are hydrolyzed either before or after transfer to noncognate tRNAs, has been characterized extensively only in the case of class I synthetases. Class II synthetases have an active-site architecture that is completely distinct from that of class I. Thus, findings on editing by class I synthetases may not be applicable generally to class II enzymes. Class II Escherichia coli proline-tRNA synthetase is shown here to misactivate alanine and to hydrolyze the noncognate amino acid before transfer to tRNA(Pro). This enzyme also is capable of rapidly deacylating a mischarged Ala-tRNA(Pro) variant. A single cysteine residue (C443) that is located within the class II-specific motif 3 consensus sequence was shown previously to be dispensable for proline-tRNA synthetase aminoacylation activity. We show here that C443 is critical for the hydrolytic editing of Ala-tRNA(Pro) by this class II synthetase.

Entities:  

Mesh:

Substances:

Year:  2000        PMID: 10922054      PMCID: PMC16796          DOI: 10.1073/pnas.97.16.8916

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  CP1 domain in Escherichia coli leucyl-tRNA synthetase is crucial for its editing function.

Authors:  J F Chen; N N Guo; T Li; E D Wang; Y L Wang
Journal:  Biochemistry       Date:  2000-06-06       Impact factor: 3.162

2.  Transfer RNA-dependent translocation of misactivated amino acids to prevent errors in protein synthesis.

Authors:  T K Nomanbhoy; T L Hendrickson; P Schimmel
Journal:  Mol Cell       Date:  1999-10       Impact factor: 17.970

3.  Role of zinc ion in translational accuracy becomes crystal clear.

Authors:  K Musier-Forsyth; P J Beuning
Journal:  Nat Struct Biol       Date:  2000-06

4.  Enzymatic aminoacylation of single-stranded RNA with an RNA cofactor.

Authors:  K Musier-Forsyth; S Scaringe; N Usman; P Schimmel
Journal:  Proc Natl Acad Sci U S A       Date:  1991-01-01       Impact factor: 11.205

Review 5.  Universal rules and idiosyncratic features in tRNA identity.

Authors:  R Giegé; M Sissler; C Florentz
Journal:  Nucleic Acids Res       Date:  1998-11-15       Impact factor: 16.971

6.  Association of transfer RNA acceptor identity with a helical irregularity.

Authors:  W H McClain; Y M Chen; K Foss; J Schneider
Journal:  Science       Date:  1988-12-23       Impact factor: 47.728

7.  Rapid deacylation by isoleucyl transfer ribonucleic acid synthetase of isoleucine-specific transfer ribonucleic acid aminoacylated with valine.

Authors:  E W Eldred; P R Schimmel
Journal:  J Biol Chem       Date:  1972-05-10       Impact factor: 5.157

8.  Transfer ribonucleic acid-induced hydrolysis of valyladenylate bound to isoleucyl ribonucleic acid synthetase.

Authors:  A N Baldwin; P Berg
Journal:  J Biol Chem       Date:  1966-02-25       Impact factor: 5.157

Review 9.  Enzymic editing mechanisms and the genetic code.

Authors:  A R Fersht
Journal:  Proc R Soc Lond B Biol Sci       Date:  1981-08-19

10.  Chemical modification and site-directed mutagenesis of the single cysteine in motif 3 of class II Escherichia coli prolyl-tRNA synthetase.

Authors:  C Stehlin; D H Heacock; H Liu; K Musier-Forsyth
Journal:  Biochemistry       Date:  1997-03-11       Impact factor: 3.162

View more
  59 in total

Review 1.  Aminoacyl-tRNA synthetases: versatile players in the changing theater of translation.

Authors:  Christopher Francklyn; John J Perona; Joern Puetz; Ya-Ming Hou
Journal:  RNA       Date:  2002-11       Impact factor: 4.942

2.  Interstice mutations that block site-to-site translocation of a misactivated amino acid bound to a class I tRNA synthetase.

Authors:  Anthony C Bishop; Kirk Beebe; Paul R Schimmel
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-06       Impact factor: 11.205

3.  Aminoacyl transfer rate dictates choice of editing pathway in threonyl-tRNA synthetase.

Authors:  Anand Minajigi; Christopher S Francklyn
Journal:  J Biol Chem       Date:  2010-05-26       Impact factor: 5.157

4.  Ancestral AlaX editing enzymes for control of genetic code fidelity are not tRNA-specific.

Authors:  Eva Maria Novoa; Oscar Vargas-Rodriguez; Stefanie Lange; Yuki Goto; Hiroaki Suga; Karin Musier-Forsyth; Lluís Ribas de Pouplana
Journal:  J Biol Chem       Date:  2015-02-27       Impact factor: 5.157

5.  Crystallization and preliminary X-ray crystallographic study of the wild type and two mutants of the CP1 hydrolytic domain from Aquifex aeolicus leucyl-tRNA synthetase.

Authors:  Vincent Cura; Natacha Olieric; Alexandre Guichard; En-Duo Wang; Dino Moras; Gilbert Eriani; Jean Cavarelli
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-09-13

6.  Homologous trans-editing factors with broad tRNA specificity prevent mistranslation caused by serine/threonine misactivation.

Authors:  Ziwei Liu; Oscar Vargas-Rodriguez; Yuki Goto; Eva Maria Novoa; Lluís Ribas de Pouplana; Hiroaki Suga; Karin Musier-Forsyth
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-27       Impact factor: 11.205

Review 7.  tRNAs: cellular barcodes for amino acids.

Authors:  Rajat Banerjee; Shawn Chen; Kiley Dare; Marla Gilreath; Mette Praetorius-Ibba; Medha Raina; Noah M Reynolds; Theresa Rogers; Hervé Roy; Srujana S Yadavalli; Michael Ibba
Journal:  FEBS Lett       Date:  2010-01-21       Impact factor: 4.124

8.  The physiological target for LeuRS translational quality control is norvaline.

Authors:  Nevena Cvetesic; Andrés Palencia; Ivan Halasz; Stephen Cusack; Ita Gruic-Sovulj
Journal:  EMBO J       Date:  2014-06-16       Impact factor: 11.598

9.  Crowder-Induced Conformational Ensemble Shift in Escherichia coli Prolyl-tRNA Synthetase.

Authors:  Lauren M Adams; Ryan J Andrews; Quin H Hu; Heidi L Schmit; Sanchita Hati; Sudeep Bhattacharyya
Journal:  Biophys J       Date:  2019-08-31       Impact factor: 4.033

10.  A freestanding proofreading domain is required for protein synthesis quality control in Archaea.

Authors:  Dragana Korencic; Ivan Ahel; James Schelert; Meik Sacher; Benfang Ruan; Constantinos Stathopoulos; Paul Blum; Michael Ibba; Dieter Söll
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-06       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.