Literature DB >> 10878253

ATP-dependent chromatin remodeling: going mobile.

C L Peterson1.   

Abstract

Members of the ATP-dependent class of chromatin remodeling enzymes are found in all eukaryotes where they play key roles in many DNA-mediated processes. Each of these enzymes are multi-subunit assembles that hydrolyze approximately 1000 ATP/min. The energy of ATP hydrolysis is used to disrupt the chromatin structure which can be scored by enhanced factor binding, disruption of the DNase I cleavage pattern of mononucleosomes, formation of dinucleosomes, movements of histone octamers in cis and in trans, and by generation of nuclease hypersensitive sites. Here the biochemical properties of these enzymes are reviewed and the manner in which ATP-driven nucleosome movements might account for many of these diverse activities is discussed.

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Year:  2000        PMID: 10878253     DOI: 10.1016/s0014-5793(00)01673-2

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  23 in total

1.  A critical epitope for substrate recognition by the nucleosome remodeling ATPase ISWI.

Authors:  Cedric R Clapier; Karl P Nightingale; Peter B Becker
Journal:  Nucleic Acids Res       Date:  2002-02-01       Impact factor: 16.971

2.  Nucleosome repositioning via loop formation.

Authors:  I M Kulić; H Schiessel
Journal:  Biophys J       Date:  2003-05       Impact factor: 4.033

3.  The W303 genetic background affects the isw2 delta mutant phenotype in Saccharomyces cerevisiae.

Authors:  P Trachtulcová; I Frýdlová; I Janatová; A Dorosh; J Hasek
Journal:  Folia Microbiol (Praha)       Date:  2003       Impact factor: 2.099

Review 4.  Epigenetic mechanisms in cardiac development and disease.

Authors:  Marcus Vallaster; Caroline Dacwag Vallaster; Sean M Wu
Journal:  Acta Biochim Biophys Sin (Shanghai)       Date:  2012-01       Impact factor: 3.848

5.  Effect of force on mononucleosomal dynamics.

Authors:  Shirley Mihardja; Andrew J Spakowitz; Yongli Zhang; Carlos Bustamante
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-16       Impact factor: 11.205

Review 6.  INO80 subfamily of chromatin remodeling complexes.

Authors:  Yunhe Bao; Xuetong Shen
Journal:  Mutat Res       Date:  2007-01-21       Impact factor: 2.433

7.  Formation and positioning of nucleosomes: effect of sequence-dependent long-range correlated structural disorder.

Authors:  C Vaillant; B Audit; C Thermes; A Arnéodo
Journal:  Eur Phys J E Soft Matter       Date:  2006-02-14       Impact factor: 1.890

8.  Transport of nucleosome core particles in semidilute DNA solutions.

Authors:  Stéphanie Mangenot; Simon Keller; Joachim Rädler
Journal:  Biophys J       Date:  2003-09       Impact factor: 4.033

9.  The DNA chaperone HMGB1 facilitates ACF/CHRAC-dependent nucleosome sliding.

Authors:  Tiziana Bonaldi; Gernot Längst; Ralf Strohner; Peter B Becker; Marco E Bianchi
Journal:  EMBO J       Date:  2002-12-16       Impact factor: 11.598

10.  Towards understanding the epigenetics of transcription by chromatin structure and the nuclear matrix.

Authors:  Rui Pires Martins; Stephen A Krawetz
Journal:  Gene Ther Mol Biol       Date:  2005
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