Literature DB >> 10872332

Higher-order structure of nucleosome oligomers from short-repeat chromatin.

E C Pearson1, P J Butler, J O Thomas.   

Abstract

Sedimentation measurements and electron microscopy at a series of ionic strengths suggest that chromatin from neurons of the cerebral cortex is able to form condensed structures in vitro that are probably several turns of a solenoid with about six nucleosomes per turn. Since neuronal chromatin has a short nucleosomal repeat (approximately 165 bp) allowing virtually no linker DNA between nucleosomes, and yet forms apparently 'normal' elements of solenoid, the packing of nucleosomes in the solenoid must be highly constrained. This permits only a limited number of possible models, and enables tentative suggestions to be made about the location of the linker DNA in the typical solenoid.

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Year:  1983        PMID: 10872332      PMCID: PMC555284          DOI: 10.1002/j.1460-2075.1983.tb01593.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  29 in total

1.  Preparation of native chromatin and damage caused by shearing.

Authors:  M Noll; J O Thomas; R D Kornberg
Journal:  Science       Date:  1975-03-28       Impact factor: 47.728

2.  Involvement of histone H1 in the organization of the chromosome fiber.

Authors:  M Renz; P Nehls; J Hozier
Journal:  Proc Natl Acad Sci U S A       Date:  1977-05       Impact factor: 11.205

3.  Analysis of histones associated with neuronal and glial nuclei exhibiting divergent DNA repeat lengths.

Authors:  P D Greenwood; J C Silver; I R Brown
Journal:  J Neurochem       Date:  1981-08       Impact factor: 5.372

4.  Higher order coiling of DNA in chromatin.

Authors:  A Worcel; C Benyajati
Journal:  Cell       Date:  1977-09       Impact factor: 41.582

5.  Histones H1 and H5: one or two molecules per nucleosome?

Authors:  D L Bates; J O Thomas
Journal:  Nucleic Acids Res       Date:  1981-11-25       Impact factor: 16.971

6.  Changes in chromatin folding in solution.

Authors:  P J Butler; J O Thomas
Journal:  J Mol Biol       Date:  1980-07-15       Impact factor: 5.469

7.  Histones and DNA increase synchronously in neurons during early postnatal development of the rat forebrain cortex.

Authors:  A Bregnard; F Ruch; H Lutz; C C Kuenzle
Journal:  Histochemistry       Date:  1979-07-11

8.  Fractionation of nuclei from brain by zonal centrifugation and a study of the ribonucleic acid polymerase activity in the various classes of nuclei.

Authors:  J Austoker; D Cox; A P Mathias
Journal:  Biochem J       Date:  1972-10       Impact factor: 3.857

9.  Chromatin organization in the rat hypothalamus during early development.

Authors:  S A Whatley; C Hall; L Lim
Journal:  Biochem J       Date:  1981-04-15       Impact factor: 3.857

10.  Orientation of nucleosomes in the thirty-nanometer chromatin fiber.

Authors:  H Yabuki; N Dattagupta; D M Crothers
Journal:  Biochemistry       Date:  1982-09-28       Impact factor: 3.162

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  20 in total

1.  Higher-order structure of Saccharomyces cerevisiae chromatin.

Authors:  P T Lowary; J Widom
Journal:  Proc Natl Acad Sci U S A       Date:  1989-11       Impact factor: 11.205

2.  Nucleosome geometry and internucleosomal interactions control the chromatin fiber conformation.

Authors:  Nick Kepper; Dietrich Foethke; Rene Stehr; Gero Wedemann; Karsten Rippe
Journal:  Biophys J       Date:  2008-01-22       Impact factor: 4.033

3.  Hydrodynamic studies on defined heterochromatin fragments support a 30-nm fiber having six nucleosomes per turn.

Authors:  Rodolfo Ghirlando; Gary Felsenfeld
Journal:  J Mol Biol       Date:  2008-01-03       Impact factor: 5.469

4.  Cooperative binding of the globular domains of histones H1 and H5 to DNA.

Authors:  J O Thomas; C Rees; J T Finch
Journal:  Nucleic Acids Res       Date:  1992-01-25       Impact factor: 16.971

5.  DNA methylation effects on tetra-nucleosome compaction and aggregation.

Authors:  Isabel Jimenez-Useche; Nathan P Nurse; Yuqing Tian; Bhargav S Kansara; Daphne Shim; Chongli Yuan
Journal:  Biophys J       Date:  2014-10-07       Impact factor: 4.033

6.  The superstructure of chromatin and its condensation mechanism. III: Effect of monovalent and divalent cations X-ray solution scattering and hydrodynamic studies.

Authors:  M H Koch; M C Vega; Z Sayers; A M Michon
Journal:  Eur Biophys J       Date:  1987       Impact factor: 1.733

7.  Chromatin fibers are left-handed double helices with diameter and mass per unit length that depend on linker length.

Authors:  S P Williams; B D Athey; L J Muglia; R S Schappe; A H Gough; J P Langmore
Journal:  Biophys J       Date:  1986-01       Impact factor: 4.033

8.  Irregular Chromatin: Packing Density, Fiber Width, and Occurrence of Heterogeneous Clusters.

Authors:  Gaurav Bajpai; Ranjith Padinhateeri
Journal:  Biophys J       Date:  2019-11-14       Impact factor: 4.033

9.  Differential nucleosome spacing in neurons and glia.

Authors:  Sean C Clark; Răzvan V Chereji; Philip R Lee; R Douglas Fields; David J Clark
Journal:  Neurosci Lett       Date:  2019-10-19       Impact factor: 3.046

10.  Chromatin structure outside and inside the nucleus.

Authors:  Rodolfo Ghirlando; Gary Felsenfeld
Journal:  Biopolymers       Date:  2013-04       Impact factor: 2.505

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