Literature DB >> 3569164

The superstructure of chromatin and its condensation mechanism. III: Effect of monovalent and divalent cations X-ray solution scattering and hydrodynamic studies.

M H Koch, M C Vega, Z Sayers, A M Michon.   

Abstract

Solutions of rat liver and chicken erythrocyte chromatin at different ionic strengths were characterized by synchrotron X-ray solution scattering, ultracentrifugation, density and viscosity measurements. Previous observations on nuclei were extended to rat liver, calf thymus and yeast nuclei. It is shown that with monovalent cations condensation is independent of the nature of the cation whereas with divalent cations there are significant differences related to the preference of base binding over phosphate binding. The consistency of hydrodynamic and scattering results confirm the view that chromatin in solution at low ionic strength has a helix-like superstructure. A survey of X-ray and neutron scattering results in the literature shows that previous interpretations, e.g. in terms of a 10 nm filament, are incompatible with the experimental data at low resolution.

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Year:  1987        PMID: 3569164     DOI: 10.1007/bf00254896

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  46 in total

1.  Involvement of histone H1 in the organization of the chromosome fiber.

Authors:  M Renz; P Nehls; J Hozier
Journal:  Proc Natl Acad Sci U S A       Date:  1977-05       Impact factor: 11.205

2.  Neutron scattering on nuclei.

Authors:  P Baudy; S Bram
Journal:  Nucleic Acids Res       Date:  1979-04       Impact factor: 16.971

3.  Studies on the structure of isolated chromatin in three different solvents.

Authors:  H Hollandt; H Notbohm; F Riedel; E Harbers
Journal:  Nucleic Acids Res       Date:  1979       Impact factor: 16.971

4.  Specific sites of interaction between histones and DNA in chromatin.

Authors:  R Axel; W Melchior; B Sollner-Webb; G Felsenfeld
Journal:  Proc Natl Acad Sci U S A       Date:  1974-10       Impact factor: 11.205

5.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

6.  Interaction and conformational changes of chromatin with divalent ions.

Authors:  N Borochov; J Ausio; H Eisenberg
Journal:  Nucleic Acids Res       Date:  1984-04-11       Impact factor: 16.971

7.  Structure of chromatin and the linking number of DNA.

Authors:  A Worcel; S Strogatz; D Riley
Journal:  Proc Natl Acad Sci U S A       Date:  1981-03       Impact factor: 11.205

8.  The layered organization of nucleosomes in 30 nm chromatin fibers.

Authors:  J A Subirana; S Muñoz-Guerra; J Aymamí; M Radermacher; J Frank
Journal:  Chromosoma       Date:  1985       Impact factor: 4.316

9.  Structure of the 300A chromatin filament: X-ray diffraction from oriented samples.

Authors:  J Widom; A Klug
Journal:  Cell       Date:  1985-11       Impact factor: 41.582

10.  Chromatin fiber dimensions and nucleosome orientation: a neutron scattering investigation.

Authors:  P Baudy; S Bram
Journal:  Nucleic Acids Res       Date:  1978-10       Impact factor: 16.971

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  10 in total

1.  The superstructure of chromatin and its condensation mechanism. VI. Electric dichroism and model calculations.

Authors:  M H Koch; Z Sayers; A M Michon; P Sicre; R Marquet; C Houssier
Journal:  Eur Biophys J       Date:  1989       Impact factor: 1.733

2.  X-ray small angle scattering study of chromatin as a function of fiber length.

Authors:  E Maccioni; L Vergani; A Dembo; G Mascetti; C Nicolini
Journal:  Mol Biol Rep       Date:  1998-03       Impact factor: 2.316

3.  The diameter of chromatin fibres depends on linker length.

Authors:  C Alegre; J A Subirana
Journal:  Chromosoma       Date:  1989-06       Impact factor: 4.316

4.  Molecular flexibility of extended and compacted polynucleosomes. A steady-state fluorescence polarization study.

Authors:  T Härd; P E Nielsen; B Norden
Journal:  Eur Biophys J       Date:  1988       Impact factor: 1.733

5.  The superstructure of chromatin and its condensation mechanism. V. Effect of linker length, condensation by multivalent cations, solubility and electric dichroism properties.

Authors:  M H Koch; Z Sayers; A M Michon; R Marquet; C Houssier; J Willführ
Journal:  Eur Biophys J       Date:  1988       Impact factor: 1.733

6.  Small angle x-ray scattering of chromatin. Radius and mass per unit length depend on linker length.

Authors:  S P Williams; J P Langmore
Journal:  Biophys J       Date:  1991-03       Impact factor: 4.033

7.  Data preparation and evaluation techniques for x-ray diffraction microscopy.

Authors:  Jan Steinbrener; Johanna Nelson; Xiaojing Huang; Stefano Marchesini; David Shapiro; Joshua J Turner; Chris Jacobsen
Journal:  Opt Express       Date:  2010-08-30       Impact factor: 3.894

8.  The superstructure of chromatin and its condensation mechanism. IV. Enzymatic digestion, thermal denaturation, effect of netropsin and distamycin.

Authors:  M H Koch; Z Sayers; M C Vega; A M Michon
Journal:  Eur Biophys J       Date:  1987       Impact factor: 1.733

9.  The diameters of frozen-hydrated chromatin fibers increase with DNA linker length: evidence in support of variable diameter models for chromatin.

Authors:  B D Athey; M F Smith; D A Rankert; S P Williams; J P Langmore
Journal:  J Cell Biol       Date:  1990-09       Impact factor: 10.539

10.  Radial density distribution of chromatin: evidence that chromatin fibers have solid centers.

Authors:  M F Smith; B D Athey; S P Williams; J P Langmore
Journal:  J Cell Biol       Date:  1990-02       Impact factor: 10.539

  10 in total

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