Literature DB >> 10860983

Characterization of bacteriophage T4-coordinated leading- and lagging-strand synthesis on a minicircle substrate.

F Salinas1, S J Benkovic.   

Abstract

The DNA replication complex of bacteriophage T4 has been assembled as a single unit on a minicircle substrate with a replication fork that permits an independent measurement of the amount of DNA synthesis on both the leading and lagging strands. The assembled replisome consists of the T4 polymerase [gene product 43 (gp43)], clamp protein (gp45), clamp loader (gp44/62), helicase (gp41), helicase accessory factor (gp59), primase (gp61), and single-stranded DNA binding protein (gp32). We demonstrate that on the minicircle the synthesis of the leading and lagging strands are coordinated and that the C-terminal domain of the gp32 protein regulates this coordination. We show that the reconstituted replisome encompasses two coupled holoenzyme complexes and present evidence that this coupling might include a gp43 homodimer interaction.

Entities:  

Mesh:

Substances:

Year:  2000        PMID: 10860983      PMCID: PMC16522          DOI: 10.1073/pnas.97.13.7196

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

1.  Crystal structure of the DNA polymerase processivity factor of T4 bacteriophage.

Authors:  I Moarefi; D Jeruzalmi; J Turner; M O'Donnell; J Kuriyan
Journal:  J Mol Biol       Date:  2000-03-10       Impact factor: 5.469

2.  Trading places on DNA--a three-point switch underlies primer handoff from primase to the replicative DNA polymerase.

Authors:  A Yuzhakov; Z Kelman; M O'Donnell
Journal:  Cell       Date:  1999-01-08       Impact factor: 41.582

3.  Structure of the RNA portion of the RNA-linked DNA pieces in bacteriophage T4-infected Escherichia coli cells.

Authors:  Y Kurosawa; T Okazaki
Journal:  J Mol Biol       Date:  1979-12-25       Impact factor: 5.469

4.  DNA replication by bacteriophage T4 proteins. The T4 43, 32, 44--62, And 45 proteins are required for strand displacement synthesis at nicks in duplex DNA.

Authors:  N G Nossal; B M Peterlin
Journal:  J Biol Chem       Date:  1979-07-10       Impact factor: 5.157

5.  DNA replication with bacteriophage T4 proteins. Purification of the proteins encoded by T4 genes 41, 45, 44, and 62 using a complementation assay.

Authors:  N G Nossal
Journal:  J Biol Chem       Date:  1979-07-10       Impact factor: 5.157

Review 6.  Discontinuous DNA replication.

Authors:  T Ogawa; T Okazaki
Journal:  Annu Rev Biochem       Date:  1980       Impact factor: 23.643

7.  Proteolytic removal of the COOH terminus of the T4 gene 32 helix-destabilizing protein alters the T4 in vitro replication complex.

Authors:  R L Burke; B M Alberts; J Hosoda
Journal:  J Biol Chem       Date:  1980-12-10       Impact factor: 5.157

8.  Two types of replication proteins increase the rate at which T4 DNA polymerase traverses the helical regions in a single-stranded DNA template.

Authors:  C C Huang; J E Hearst; B M Alberts
Journal:  J Biol Chem       Date:  1981-04-25       Impact factor: 5.157

9.  T4 gene 32 protein trypsin-generated fragments. Fluorescence measurement of DNA-binding parameters.

Authors:  E K Spicer; K R Williams; W H Konigsberg
Journal:  J Biol Chem       Date:  1979-07-25       Impact factor: 5.157

10.  Pentaribonucleotides of mixed sequence are synthesized and efficiently prime de novo DNA chain starts in the T4 bacteriophage DNA replication system.

Authors:  C C Liu; B M Alberts
Journal:  Proc Natl Acad Sci U S A       Date:  1980-10       Impact factor: 11.205

View more
  21 in total

1.  Creating a dynamic picture of the sliding clamp during T4 DNA polymerase holoenzyme assembly by using fluorescence resonance energy transfer.

Authors:  M A Trakselis; S C Alley; E Abel-Santos; S J Benkovic
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

2.  Characterization of DNA synthesis catalyzed by bacteriophage T4 replication complexes reconstituted on synthetic circular substrates.

Authors:  Farid A Kadyrov; John W Drake
Journal:  Nucleic Acids Res       Date:  2002-10-15       Impact factor: 16.971

3.  Coordinated leading and lagging strand DNA synthesis by using the herpes simplex virus 1 replication complex and minicircle DNA templates.

Authors:  Gudrun Stengel; Robert D Kuchta
Journal:  J Virol       Date:  2010-11-10       Impact factor: 5.103

4.  3' to 5' exonuclease activity of herpes simplex virus type 1 DNA polymerase modulates its strand displacement activity.

Authors:  Yali Zhu; Kelly S Trego; Liping Song; Deborah S Parris
Journal:  J Virol       Date:  2003-09       Impact factor: 5.103

5.  Insights into Okazaki fragment synthesis by the T4 replisome: the fate of lagging-strand holoenzyme components and their influence on Okazaki fragment size.

Authors:  Danqi Chen; Hongjun Yue; Michelle M Spiering; Stephen J Benkovic
Journal:  J Biol Chem       Date:  2013-05-31       Impact factor: 5.157

6.  RNA primer handoff in bacteriophage T4 DNA replication: the role of single-stranded DNA-binding protein and polymerase accessory proteins.

Authors:  Scott W Nelson; Ravindra Kumar; Stephen J Benkovic
Journal:  J Biol Chem       Date:  2008-05-28       Impact factor: 5.157

7.  Cryo-EM structure of the replisome reveals multiple interactions coordinating DNA synthesis.

Authors:  Arkadiusz W Kulczyk; Arne Moeller; Peter Meyer; Piotr Sliz; Charles C Richardson
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-21       Impact factor: 11.205

8.  Evaluation of the role of the vaccinia virus uracil DNA glycosylase and A20 proteins as intrinsic components of the DNA polymerase holoenzyme.

Authors:  Kathleen A Boyle; Eleni S Stanitsa; Matthew D Greseth; Jill K Lindgren; Paula Traktman
Journal:  J Biol Chem       Date:  2011-05-13       Impact factor: 5.157

Review 9.  Timing, coordination, and rhythm: acrobatics at the DNA replication fork.

Authors:  Samir M Hamdan; Antoine M van Oijen
Journal:  J Biol Chem       Date:  2010-04-09       Impact factor: 5.157

10.  Coordinating DNA replication by means of priming loop and differential synthesis rate.

Authors:  Manjula Pandey; Salman Syed; Ilker Donmez; Gayatri Patel; Taekjip Ha; Smita S Patel
Journal:  Nature       Date:  2009-11-18       Impact factor: 49.962

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.