Literature DB >> 10827994

Characterization of conditions required for X-Ray diffraction experiments with protein microcrystals.

R Glaeser1, M Facciotti, P Walian, S Rouhani, J Holton, A MacDowell, R Celestre, D Cambie, H Padmore.   

Abstract

The x-ray exposure at which significant radiation damage occurs has been quantified for frozen crystals of bacteriorhodopsin. The maximum exposure to approximately 11-keV x-rays that can be tolerated for high-resolution diffraction experiments is found to be approximately 10(10) photons/microm(2), very close to the value predicted from limits that were measured earlier for electron diffraction exposures. Sample heating, which would further reduce the x-ray exposure that could be tolerated, is not expected to be significant unless the x-ray flux density is well above 10(9) photons/s-microm(2). Crystals of bacteriorhodopsin that contain approximately 10(11) unit cells are found to be large enough to give approximately 100 high-resolution diffraction patterns, each covering one degree of rotation. These measurements are used to develop simple rules of thumb for the minimum crystal size that can be used to record x-ray diffraction data from protein microcrystals. For work with very small microcrystals to be realized in practice, however, it is desirable that there be a significant reduction in the level of background scattering. Background reduction can readily be achieved by improved microcollimation of the x-ray beam, and additional gains can be realized by the use of helium rather than nitrogen in the cold gas stream that is used to keep the protein crystals frozen.

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Year:  2000        PMID: 10827994      PMCID: PMC1300899          DOI: 10.1016/S0006-3495(00)76854-8

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  6 in total

1.  Radiation damage in protein crystals at low temperature.

Authors:  A Gonzalez; C Nave
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-11-01

Review 2.  Small is beautiful: protein micro-crystallography.

Authors:  S Cusack; H Belrhali; A Bram; M Burghammer; A Perrakis; C Riekel
Journal:  Nat Struct Biol       Date:  1998-08

3.  Lipidic cubic phases: a novel concept for the crystallization of membrane proteins.

Authors:  E M Landau; J P Rosenbusch
Journal:  Proc Natl Acad Sci U S A       Date:  1996-12-10       Impact factor: 11.205

4.  X-ray structure of bacteriorhodopsin at 2.5 angstroms from microcrystals grown in lipidic cubic phases.

Authors:  E Pebay-Peyroula; G Rummel; J P Rosenbusch; E M Landau
Journal:  Science       Date:  1997-09-12       Impact factor: 47.728

5.  Electron diffraction of frozen, hydrated protein crystals.

Authors:  K A Taylor; R M Glaeser
Journal:  Science       Date:  1974-12-13       Impact factor: 47.728

6.  Nanometer spatial resolution achieved in hard x-ray imaging and Laue diffraction experiments.

Authors:  D H Bilderback; S A Hoffman; D J Thiel
Journal:  Science       Date:  1994-01-14       Impact factor: 47.728

  6 in total
  12 in total

Review 1.  Rastering strategy for screening and centring of microcrystal samples of human membrane proteins with a sub-10 microm size X-ray synchrotron beam.

Authors:  Vadim Cherezov; Michael A Hanson; Mark T Griffith; Mark C Hilgart; Ruslan Sanishvili; Venugopalan Nagarajan; Sergey Stepanov; Robert F Fischetti; Peter Kuhn; Raymond C Stevens
Journal:  J R Soc Interface       Date:  2009-06-17       Impact factor: 4.118

2.  Microcrystallography using single-bounce monocapillary optics.

Authors:  R E Gillilan; M J Cook; S W Cornaby; D H Bilderback
Journal:  J Synchrotron Radiat       Date:  2010-01-19       Impact factor: 2.616

3.  Radiation damage in protein crystals is reduced with a micron-sized X-ray beam.

Authors:  Ruslan Sanishvili; Derek W Yoder; Sudhir Babu Pothineni; Gerd Rosenbaum; Shenglan Xu; Stefan Vogt; Sergey Stepanov; Oleg A Makarov; Stephen Corcoran; Richard Benn; Venugopalan Nagarajan; Janet L Smith; Robert F Fischetti
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-28       Impact factor: 11.205

4.  Structure of an early intermediate in the M-state phase of the bacteriorhodopsin photocycle.

Authors:  M T Facciotti; S Rouhani; F T Burkard; F M Betancourt; K H Downing; R B Rose; G McDermott; R M Glaeser
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

5.  An assessment of the resolution limitation due to radiation-damage in x-ray diffraction microscopy.

Authors:  M R Howells; T Beetz; H N Chapman; C Cui; J M Holton; C J Jacobsen; J Kirz; E Lima; S Marchesini; H Miao; D Sayre; D A Shapiro; J C H Spence; D Starodub
Journal:  J Electron Spectros Relat Phenomena       Date:  2009-03-01       Impact factor: 1.957

6.  Radiation damage in macromolecular crystallography: what is it and why should we care?

Authors:  Elspeth F Garman
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

7.  The minimum crystal size needed for a complete diffraction data set.

Authors:  James M Holton; Kenneth A Frankel
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

Review 8.  A beginner's guide to radiation damage.

Authors:  James M Holton
Journal:  J Synchrotron Radiat       Date:  2009-02-25       Impact factor: 2.616

9.  A 7μm mini-beam improves diffraction data from small or imperfect crystals of macromolecules.

Authors:  Ruslan Sanishvili; Venugopalan Nagarajan; Derek Yoder; Michael Becker; Shenglan Xu; Stephen Corcoran; David L Akey; Janet L Smith; Robert F Fischetti
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2008-03-19

10.  Protein crystallography with a micrometre-sized synchrotron-radiation beam.

Authors:  Rouslan Moukhametzianov; Manfred Burghammer; Patricia C Edwards; Sebastien Petitdemange; Dimitri Popov; Maikel Fransen; Gregory McMullan; Gebhard F X Schertler; Christian Riekel
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2008-01-16
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