Literature DB >> 10772457

Expansion of scalar validation criteria to three dimensions: the R tensor

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Abstract

Assessment of quality in crystal structure determination entails analysis of global statistics. In data reduction, quality is assessed using R(merge) and mean I/sigma(I). Progress in structure solution and refinement is checked by the goodness of fit, variants of the R index, R(cryst), and its cross-validation counterpart, R(free). These statistics are useful and provide a convenient means of comparison but their scalar nature renders them unable to capture the essence of three-dimensional entities such as diffraction patterns and molecular models. A simple general method to quantify spatial variations in scalar statistics has been developed. In it, a symmetric matrix, the R tensor, is used to represent the local average residual as a function of diffraction geometry. An effective value of the statistic in question can then be found for any direction in reciprocal space. Differences between these effective R indices for individual reflections or groups of reflections can help to steer refinement strategy and assess the final structure.

Year:  2000        PMID: 10772457     DOI: 10.1107/s010876739901497x

Source DB:  PubMed          Journal:  Acta Crystallogr A        ISSN: 0108-7673            Impact factor:   2.290


  16 in total

1.  Photochemical Properties and Structure-Activity Relationships of RuII Complexes with Pyridylbenzazole Ligands as Promising Anticancer Agents.

Authors:  Dmytro Havrylyuk; David K Heidary; Leona Nease; Sean Parkin; Edith C Glazer
Journal:  Eur J Inorg Chem       Date:  2017-02-15       Impact factor: 2.524

2.  3,5-Dichloro-3',4'-dimethoxybiphenyl.

Authors:  Ram Dhakal; Sean Parkin; Hans-Joachim Lehmler
Journal:  IUCrdata       Date:  2019-04

3.  Bi- and Tetracyclic Spirotetronates from the Coal Mine Fire Isolate Streptomyces sp. LC-6-2.

Authors:  Xiachang Wang; Sherif I Elshahawi; Wenlong Cai; Yinan Zhang; Larissa V Ponomareva; Xiabin Chen; Gregory C Copley; James C Hower; Chang-Guo Zhan; Sean Parkin; Jürgen Rohr; Steven G Van Lanen; Khaled A Shaaban; Jon S Thorson
Journal:  J Nat Prod       Date:  2017-03-30       Impact factor: 4.050

4.  Ruthenium Complex "Light Switches" that are Selective for Different G-Quadruplex Structures.

Authors:  Erin Wachter; Diego Moyá; Sean Parkin; Edith C Glazer
Journal:  Chemistry       Date:  2015-11-12       Impact factor: 5.236

5.  Bis[tris-(3,5-dimethyl-1H-pyrazol-1-yl-κN(2))meth-yl]sodium trifluoro-methane-sulfonate.

Authors:  Ganna Lyubartseva; Sean Parkin; Uma Prasad Mallik
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-30

6.  13-(N,N-Di-methyl-amino)-micheliolide 0.08-hydrate.

Authors:  Shobanbabu Bommagani; Narsimha Reddy Penthala; Venumadhav Janganati; Sean Parkin; Peter A Crooks
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-11-20

7.  Monosuccinate ester of melampomagnolide B.

Authors:  Venumadhav Janganati; Narsimha Reddy Penthala; Nikhil Reddy Madadi; Sean Parkin; Peter A Crooks
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-02-28

8.  Comparison of the crystal structures of 4,4'-bis-[3-(4-methyl-piperidin-1-yl)prop-1-yn-1-yl]-1,1'-biphenyl and 4,4'-bis-[3-(2,2,6,6-tetra-methyl-piperidin-1-yl)prop-1-yn-1-yl]-1,1'-biphen-yl.

Authors:  Anqi Wan; Narsimha Reddy Penthala; E Kim Fifer; Sean Parkin; Peter A Crooks
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-09-12

9.  Boron-rich benzene and pyrene derivatives for the detection of thermal neutrons.

Authors:  Henok A Yemam; Adam Mahl; Unsal Koldemir; Tyler Remedes; Sean Parkin; Uwe Greife; Alan Sellinger
Journal:  Sci Rep       Date:  2015-09-03       Impact factor: 4.379

10.  Comparison of crystal structures of 4-(benzo[b]thio-phen-2-yl)-5-(3,4,5-tri-meth-oxy-phen-yl)-2H-1,2,3-triazole and 4-(benzo[b]thio-phen-2-yl)-2-methyl-5-(3,4,5-tri-meth-oxy-phen-yl)-2H-1,2,3-triazole.

Authors:  Narsimha Reddy Penthala; Nikhil Reddy Madadi; Shobanbabu Bommagani; Sean Parkin; Peter A Crooks
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-10-24
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