Literature DB >> 26594389

Comparison of the crystal structures of 4,4'-bis-[3-(4-methyl-piperidin-1-yl)prop-1-yn-1-yl]-1,1'-biphenyl and 4,4'-bis-[3-(2,2,6,6-tetra-methyl-piperidin-1-yl)prop-1-yn-1-yl]-1,1'-biphen-yl.

Anqi Wan1, Narsimha Reddy Penthala1, E Kim Fifer1, Sean Parkin2, Peter A Crooks1.   

Abstract

As part of a comprehensive program to discover α9α10 nicotinic acetyl-choline receptor antagonists, the title compounds C30H36N2, (I), and C36H48N2, (II), were synthesized by coupling 4,4'-bis-(3-bromo-prop-1-yn-1-yl)-1,1'-biphenyl with 4-methyl-piperidine and 2,2,6,6-tetra-methyl-piperidine, respectively, in aceto-nitrile at room temperature. In compound (I), the biphenyl system has a twisted conformation with a dihedral angle of 26.57 (6)° between the two phenyl rings of the biphenyl moiety, while in compound (II), the biphenyl moiety sits on a crystallographic inversion centre so the two phenyl rings are exactly coplanar. The terminal piperidine rings in both compound (I) and compound (II) are in the chair conformation. In compound (I), the dihedral angles about the ethynyl groups between the planes of the phenyl rings and the piperidine ring N atoms are 37.16 (16) and 14.20 (17)°. In compound (II), the corresponding dihedral angles are both 61.48 (17)°. There are no noteworthy inter-molecular inter-actions in (I), but in (II) there is a small π-overlap between inversion-related mol-ecules (1 - x, 1 - y, 1 - z), with an inter-planar spacing of 3.553 (3) Å and centroid-to-centroid separation of 3.859 (4) Å.

Entities:  

Keywords:  biphenyl ring; bis-tertiary ammonium analog; crystal structure; piperidine ring

Year:  2015        PMID: 26594389      PMCID: PMC4647388          DOI: 10.1107/S2056989015015352

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Chemical context

Previous studies have shown that the bis-quaternary ammonium compound 1′-[(1,1′-biphen­yl)-4,4′-diylbis(prop-2-yne-3,1-di­yl)]bis­(3,4-di­methyl­pyridin-1-ium) bromide (ZZ161C) is a potent and selective α9α10 nicotinic acetyl­choline receptor antagonist (Zheng et al., 2011 ▸). ZZ161C has been reported to have analgesic effects in various animal pain models (Wala et al., 2012 ▸). In order to improve the pharmacological and pharmacokinetic profile of ZZ161C, we have replaced the terminal aza­aromatic rings with fully reduced piperidine rings to obtain the title compounds (I) and (II). Single-crystal X-ray structure determinations were carried out to determine the conformations of these compounds.

Structural commentary

The title compounds, C30H36N2 (I) and C36H48N2 (II) are shown in Figs. 1 ▸ and 2 ▸, respectively. The present X-ray crystallographic study was carried out in order to ascertain the geometry of the piperidine rings and the biphenyl ring systems, as well as to obtain more detailed information about the conformation of the title compounds. Crystals of both (I) and (II) are monoclinic, space group P21/c, with Z′ = 1 and 0.5, respectively. In each compound, individual bond lengths and angles are unremarkable.
Figure 1

The mol­ecular structure of (I), with displacement ellipsoids drawn at the 50% probability level.

Figure 2

The mol­ecular structure of (II), with displacement ellipsoids drawn at the 50% probability level. Unlabelled atoms are generated by the symmetry operator (1 − x, 2 − y, 1 − z).

The piperidine rings in both of the title mol­ecules are in the chair conformation. In (I), the biphenyl rings (C20-C21-C22-C23-C30-C29) and (C16-C17-C18-C19-C28-C27) are non-coplanar, with a dihedral angle of 26.57 (6)°. For compound (II), however, the biphenyl group is strictly coplanar because the mol­ecule sits on a crystallographic inversion centre. In compound (I), the dihedral angles about the ethynyl groups between the planes of the phenyl rings and the piperidine ring N atoms are 37.16 (16) and 14.20 (17)°. In compound (II), the corresponding dihedral angles are both 61.48 (17)°.

Supra­molecular features

Other than weak van der Waals inter­actions, there are no noteworthy inter­molecular contacts in (I). In (II) there is a small π-overlap between inversion-related mol­ecules (1 − x, 1 − y, 1 − z), giving an inter­planar spacing of 3.553 (3) Å and centroid-to-centroid separation of 3.859 (4) Å.

Database survey

A search of the November 2014 release of the Cambridge Structure Database (Groom & Allen, 2014 ▸), with updates through May 2015, using the program Mogul (Bruno et al., 2004 ▸) for 4,4′ substituted biphenyl fragments was conducted. The search was restricted to non-organometallic, solvent-free structures with R < 5% and Cl as the heaviest element. There were over 1000 hits, which gave a bimodal distribution of biphenyl dihedral angles with a tight peak at 0° and a broader peak centred at 30°. The biphenyl dihedral angles in (I) and (II) are thus not unusual.

Synthesis and crystallization

In the synthesis of compound (I), 3,3′-[(1,1′-biphen­yl)-4,4′-di­yl]-bis­(prop-2-yn-1-ol) was synthesized by coupling 1,2,4,5-tetra­iodo­benzene with 4-pentyn-1-ol. Bis-(tri­phenyl­phos­phine)palladium(II) dichloride and copper(I) iodide were used as catalysts. The mixture was stirred at room temperature for 24 h under argon. The obtained 3,3′-[(1,1′-biphen­yl)-4,4′-di­yl]-bis­(prop-2-yn-1-ol) was converted to 4,4′-bis-(3-bromo­prop-1-yn-1-yl)-1,1′-biphenyl using bromo­methane and tri­phenyl­phosphine in anhydrous methyl­ene chloride at room temperature. To a suspension of the 4,4′-bis­(3-bromo­prop-1-yn-1-yl)-1,1′-biphenyl (100.0 mg, 0.26 mmol) in aceto­nitrile (7 mL) was added 4-methyl­piperidine (77.2 mg, 0.78 mmol) and the reaction mixture stirred for two hours at room temperature to obtain compound (I). Aceto­nitrile was removed from the reaction mixture under reduced pressure and the resulting residue was partitioned between water and di­chloro­methane. The organic layers were collected and combined. The extract (organic layer) was dried over anhydrous sodium sulfate, filtered, and the filtrate concentrated under reduced pressure. The resulting crude sample of compound (I) was purified by column chromatography (di­chloro­methane/methanol, 100:2 v/v). Yield: 80%. A crude sample of compound (II) was prepared using the same experimental conditions for the preparation of compound (I) but utilizing 2,2,6,6-tetra­methyl­piperidine (110.0 mg, 0.78 mmol) instead of 4-methyl­piperidine. Column chromatography (dichlormethane/methanol 100:2 v/v) was then used for purification of (II). Yield: 80%. Compound (I) and (II) were each dissolved separately in a mixture of di­chloro­methane/methanol (2:1 v/v). Yellow crystals of both compounds were obtained by slow evaporation of the solution at room temperature over 24 h. Compound (I) 1H-NMR (400 Mz, CDCl3): δ 7.49 (q, 8H), 3.52 (s, 4H), 2.97 (d, 4H), 2.26 (t, 4H) p.p.m.; 13C-NMR (100 Mz, CDCl3): δ 132.92, 132.19, 126.76, 122.36, 85.13, 52.83, 48.09, 34.02, 30.20, 21.74 p.p.m. Compound (II) 1H-NMR (400 Mz, CDCl3): δ 7.50 (q, 8H), 3.62 (s, 4H), 1.61–1.60 (m, 8H), 1.52–1.51 (m, 4H), 1.22 (s, 24H) p.p.m. 13C-NMR (100 Mz, CDCl3): δ 139.47, 131.88, 126.61, 123.42, 94.00, 80.78, 55.00, 41.16, 33.87, 27.49, 17.81 p.p.m.

Refinement

Crystal data, data collection and structure refinement details are summarized in Table 1 ▸. H atoms were found in difference Fourier maps, but subsequently included in the refinement using riding models, with constrained distances set to 0.95 Å (Csp 2H), 0.98 Å (RCH3), 0.99 Å (R 2CH2) and 1.00 Å (R 3CH). U iso(H) parameters were set to values of either 1.2U eq(C) or 1.5U eq(C) (RCH3 only) of the attached atom. The final models were checked using an R-tensor (Parkin, 2000 ▸) and by PLATON (Spek, 2009 ▸).
Table 1

Experimental details

 (I)(II)
Crystal data
Chemical formulaC30H36N2 C36H48N2
M r 424.61508.76
Crystal system, space groupMonoclinic, P21/c Monoclinic, P21/c
Temperature (K)9090
a, b, c (Å)21.9870 (6), 7.0390 (3), 15.7840 (11)16.0591 (3), 6.2267 (1), 15.5921 (3)
β (°)99.0310 (19)100.895 (1)
V3)2412.6 (2)1531.03 (5)
Z 42
Radiation typeMo KαCu Kα
μ (mm−1)0.070.47
Crystal size (mm)0.32 × 0.30 × 0.030.22 × 0.04 × 0.03
 
Data collection
DiffractometerNonius KappaCCDBruker X8 Proteum
Absorption correctionMulti-scan (SADABS; Sheldrick, 2008a )Multi-scan (SADABS; Bruker, 2006)
T min, T max 0.764, 0.9580.767, 0.929
No. of measured, independent and observed [I > 2σ(I)] reflections54455, 5546, 334719631, 2797, 2405
R int 0.0660.053
(sin θ/λ)max−1)0.6500.602
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.049, 0.144, 1.020.050, 0.137, 1.05
No. of reflections55462797
No. of parameters291176
H-atom treatmentH-atom parameters constrainedH-atom parameters constrained
Δρmax, Δρmin (e Å−3)0.22, −0.220.24, −0.24

Computer programs: COLLECT (Nonius, 1998 ▸), APEX2 and SAINT (Bruker, 2006 ▸), SCALEPACK and DENZO-SMN (Otwinowski & Minor, 2006 ▸), SHELXS97, SHELXTL and XP in SHELXTL (Sheldrick, 2008b ▸), SHELXL2014 (Sheldrick, 2015 ▸) and CIFFIX (Parkin, 2013 ▸).

Crystal structure: contains datablock(s) global, I, II. DOI: 10.1107/S2056989015015352/rz5164sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015015352/rz5164Isup2.hkl Structure factors: contains datablock(s) II. DOI: 10.1107/S2056989015015352/rz5164IIsup3.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015015352/rz5164Isup4.cml Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015015352/rz5164IIsup5.cml CCDC references: 1419252, 1419251 Additional supporting information: crystallographic information; 3D view; checkCIF report
C30H36N2F(000) = 920
Mr = 424.61Dx = 1.169 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 21.9870 (6) ÅCell parameters from 5987 reflections
b = 7.0390 (3) Åθ = 1.0–27.5°
c = 15.7840 (11) ŵ = 0.07 mm1
β = 99.0310 (19)°T = 90 K
V = 2412.6 (2) Å3Plate, colourless
Z = 40.32 × 0.30 × 0.03 mm
Nonius KappaCCD diffractometer5546 independent reflections
Radiation source: fine-focus sealed-tube3347 reflections with I > 2σ(I)
Detector resolution: 9.1 pixels mm-1Rint = 0.066
φ and ω scans at fixed χ = 55°θmax = 27.5°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 2008a)h = −28→28
Tmin = 0.764, Tmax = 0.958k = −9→9
54455 measured reflectionsl = −20→20
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.049Hydrogen site location: difference Fourier map
wR(F2) = 0.144H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0706P)2 + 0.3882P] where P = (Fo2 + 2Fc2)/3
5546 reflections(Δ/σ)max < 0.001
291 parametersΔρmax = 0.22 e Å3
0 restraintsΔρmin = −0.22 e Å3
Experimental. The crystal was mounted with polyisobutene oil on the tip of a fine glass fibre, which was fastened in a copper mounting pin with electrical solder. It was placed directly into the cold gas stream of a liquid nitrogen based cryostat, according to published methods (Hope, 1994; Parkin & Hope, 1998).Diffraction data were collected with the crystal at 90 K, which is standard practice in this laboratory for the majority of flash-cooled crystals.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement progress was checked using PLATON (Spek, 2009) and by an R-tensor (Parkin, 2000). The final model was further checked with the IUCr utility checkCIF.
xyzUiso*/Ueq
N10.20730 (5)0.24205 (18)0.41351 (8)0.0245 (3)
N20.79153 (5)0.22850 (18)−0.16448 (8)0.0234 (3)
C10.19401 (7)0.4165 (2)0.36333 (10)0.0255 (4)
H1A0.21710.41530.31430.031*
H1B0.20800.52770.39960.031*
C20.12538 (7)0.4349 (2)0.33012 (10)0.0268 (4)
H2A0.11790.55100.29460.032*
H2B0.10270.44780.37930.032*
C30.10128 (7)0.2625 (2)0.27674 (10)0.0246 (4)
H3A0.12310.25690.22580.030*
C40.11755 (6)0.0832 (2)0.32978 (10)0.0259 (4)
H4A0.09470.08220.37910.031*
H4B0.1049−0.03000.29410.031*
C50.18653 (6)0.0736 (2)0.36255 (10)0.0250 (4)
H5A0.1957−0.04160.39820.030*
H5B0.20920.06440.31320.030*
C60.03225 (7)0.2769 (2)0.24399 (10)0.0304 (4)
H6A0.01880.16500.20910.046*
H6B0.02390.39180.20900.046*
H6C0.00980.28330.29290.046*
C70.80978 (7)0.0602 (2)−0.11219 (10)0.0251 (4)
H7A0.7993−0.0555−0.14700.030*
H7B0.78670.0566−0.06310.030*
C80.87867 (7)0.0625 (2)−0.07886 (10)0.0263 (4)
H8A0.90170.0561−0.12790.032*
H8B0.8897−0.0505−0.04240.032*
C90.89727 (7)0.2419 (2)−0.02685 (10)0.0248 (4)
H9A0.87560.24100.02430.030*
C100.87516 (7)0.4146 (2)−0.08094 (10)0.0264 (4)
H10A0.89810.4233−0.13000.032*
H10B0.88380.5309−0.04590.032*
C110.80634 (7)0.4027 (2)−0.11454 (10)0.0253 (4)
H11A0.78310.4048−0.06570.030*
H11B0.79360.5146−0.15110.030*
C120.96641 (7)0.2486 (2)0.00546 (10)0.0308 (4)
H12A0.97860.13620.04070.046*
H12B0.97630.36350.04000.046*
H12C0.98880.2505−0.04360.046*
C130.27358 (6)0.2281 (2)0.44724 (10)0.0266 (4)
H13A0.28070.11320.48360.032*
H13B0.28580.33970.48420.032*
C140.31350 (7)0.2189 (2)0.38025 (10)0.0254 (4)
C150.34323 (7)0.2140 (2)0.32287 (10)0.0237 (3)
C160.38357 (6)0.2046 (2)0.25885 (9)0.0215 (3)
C170.37212 (6)0.3064 (2)0.18216 (9)0.0229 (3)
H17A0.33540.37880.16910.027*
C180.41397 (6)0.3028 (2)0.12486 (9)0.0214 (3)
H18A0.40540.37310.07300.026*
C190.46856 (6)0.1975 (2)0.14209 (9)0.0198 (3)
C200.51543 (6)0.2019 (2)0.08399 (9)0.0199 (3)
C210.57773 (6)0.1686 (2)0.11555 (9)0.0236 (4)
H21A0.58980.14230.17480.028*
C220.62205 (7)0.1732 (2)0.06218 (9)0.0250 (4)
H22A0.66400.15050.08520.030*
C230.60560 (7)0.2107 (2)−0.02488 (10)0.0225 (3)
C240.64979 (7)0.2140 (2)−0.08346 (10)0.0247 (4)
C250.68349 (7)0.2177 (2)−0.13613 (10)0.0244 (4)
C260.72570 (6)0.2217 (2)−0.20057 (9)0.0256 (4)
H26A0.71810.1073−0.23720.031*
H26B0.71570.3341−0.23790.031*
C270.43683 (6)0.0935 (2)0.27488 (9)0.0226 (3)
H27A0.44460.01930.32570.027*
C280.47825 (6)0.0904 (2)0.21758 (9)0.0223 (3)
H28A0.51410.01380.22970.027*
C290.49939 (7)0.2415 (2)−0.00348 (10)0.0214 (3)
H29A0.45760.2659−0.02660.026*
C300.54362 (7)0.2455 (2)−0.05680 (9)0.0221 (3)
H30A0.53170.2723−0.11610.027*
U11U22U33U12U13U23
N10.0214 (6)0.0309 (8)0.0216 (7)−0.0012 (5)0.0049 (5)−0.0001 (6)
N20.0216 (6)0.0271 (8)0.0218 (7)−0.0004 (5)0.0045 (5)−0.0014 (5)
C10.0259 (8)0.0268 (9)0.0243 (8)−0.0011 (7)0.0061 (7)−0.0036 (7)
C20.0278 (8)0.0273 (9)0.0255 (8)0.0033 (7)0.0053 (7)−0.0013 (7)
C30.0228 (8)0.0299 (9)0.0216 (8)0.0002 (6)0.0051 (6)−0.0005 (7)
C40.0244 (8)0.0274 (9)0.0257 (8)−0.0029 (7)0.0037 (7)0.0010 (7)
C50.0256 (8)0.0253 (9)0.0247 (8)−0.0018 (6)0.0053 (7)0.0016 (7)
C60.0267 (8)0.0352 (10)0.0284 (9)0.0020 (7)0.0014 (7)0.0009 (7)
C70.0271 (8)0.0243 (9)0.0250 (8)−0.0010 (7)0.0071 (7)−0.0026 (7)
C80.0263 (8)0.0263 (9)0.0263 (9)0.0036 (7)0.0044 (7)−0.0008 (7)
C90.0262 (8)0.0287 (9)0.0202 (8)−0.0008 (7)0.0059 (6)−0.0006 (7)
C100.0294 (8)0.0242 (9)0.0252 (8)−0.0028 (7)0.0028 (7)0.0013 (7)
C110.0284 (8)0.0234 (9)0.0244 (8)0.0008 (7)0.0048 (7)0.0014 (7)
C120.0283 (8)0.0347 (10)0.0285 (9)0.0005 (7)0.0024 (7)−0.0014 (7)
C130.0210 (8)0.0367 (10)0.0226 (8)−0.0013 (7)0.0048 (6)0.0010 (7)
C140.0227 (8)0.0276 (9)0.0257 (8)−0.0022 (7)0.0036 (7)−0.0007 (7)
C150.0219 (8)0.0221 (8)0.0263 (8)−0.0016 (6)0.0014 (7)−0.0010 (7)
C160.0219 (7)0.0205 (8)0.0222 (8)−0.0036 (6)0.0040 (6)−0.0024 (6)
C170.0200 (7)0.0214 (8)0.0270 (8)0.0011 (6)0.0031 (6)−0.0007 (7)
C180.0224 (7)0.0207 (8)0.0207 (8)−0.0002 (6)0.0019 (6)0.0020 (6)
C190.0209 (7)0.0180 (8)0.0206 (8)−0.0032 (6)0.0033 (6)−0.0027 (6)
C200.0219 (7)0.0152 (8)0.0232 (8)−0.0004 (6)0.0053 (6)−0.0018 (6)
C210.0261 (8)0.0231 (9)0.0213 (8)0.0035 (6)0.0030 (7)0.0015 (7)
C220.0210 (8)0.0269 (9)0.0271 (8)0.0023 (6)0.0041 (7)0.0001 (7)
C230.0250 (8)0.0181 (8)0.0257 (8)0.0013 (6)0.0083 (7)−0.0008 (7)
C240.0252 (8)0.0225 (9)0.0260 (8)0.0009 (6)0.0030 (7)0.0004 (7)
C250.0221 (8)0.0254 (9)0.0259 (8)−0.0001 (6)0.0044 (7)0.0000 (7)
C260.0231 (8)0.0320 (9)0.0224 (8)−0.0001 (7)0.0059 (6)−0.0020 (7)
C270.0251 (8)0.0213 (9)0.0213 (8)−0.0012 (6)0.0034 (6)0.0012 (6)
C280.0213 (7)0.0205 (8)0.0247 (8)0.0018 (6)0.0026 (6)−0.0004 (6)
C290.0217 (7)0.0178 (8)0.0240 (8)0.0001 (6)0.0019 (6)−0.0015 (6)
C300.0267 (8)0.0197 (8)0.0199 (8)−0.0007 (6)0.0034 (6)0.0009 (6)
N1—C51.4647 (19)C11—H11B0.9900
N1—C11.4657 (19)C12—H12A0.9800
N1—C131.4741 (18)C12—H12B0.9800
N2—C71.4631 (19)C12—H12C0.9800
N2—C111.4666 (19)C13—C141.478 (2)
N2—C261.4707 (18)C13—H13A0.9900
C1—C21.523 (2)C13—H13B0.9900
C1—H1A0.9900C14—C151.198 (2)
C1—H1B0.9900C15—C161.447 (2)
C2—C31.524 (2)C16—C171.395 (2)
C2—H2A0.9900C16—C271.398 (2)
C2—H2B0.9900C17—C181.3880 (19)
C3—C41.526 (2)C17—H17A0.9500
C3—C61.5280 (19)C18—C191.401 (2)
C3—H3A1.0000C18—H18A0.9500
C4—C51.5252 (19)C19—C281.3976 (19)
C4—H4A0.9900C19—C201.483 (2)
C4—H4B0.9900C20—C291.398 (2)
C5—H5A0.9900C20—C211.4019 (19)
C5—H5B0.9900C21—C221.3848 (19)
C6—H6A0.9800C21—H21A0.9500
C6—H6B0.9800C22—C231.390 (2)
C6—H6C0.9800C22—H22A0.9500
C7—C81.523 (2)C23—C301.3984 (19)
C7—H7A0.9900C23—C241.443 (2)
C7—H7B0.9900C24—C251.197 (2)
C8—C91.527 (2)C25—C261.481 (2)
C8—H8A0.9900C26—H26A0.9900
C8—H8B0.9900C26—H26B0.9900
C9—C101.520 (2)C27—C281.3807 (19)
C9—C121.526 (2)C27—H27A0.9500
C9—H9A1.0000C28—H28A0.9500
C10—C111.525 (2)C29—C301.383 (2)
C10—H10A0.9900C29—H29A0.9500
C10—H10B0.9900C30—H30A0.9500
C11—H11A0.9900
C5—N1—C1111.28 (11)H10A—C10—H10B108.0
C5—N1—C13110.47 (12)N2—C11—C10110.91 (12)
C1—N1—C13110.65 (12)N2—C11—H11A109.5
C7—N2—C11110.83 (11)C10—C11—H11A109.5
C7—N2—C26110.99 (12)N2—C11—H11B109.5
C11—N2—C26110.93 (12)C10—C11—H11B109.5
N1—C1—C2111.08 (12)H11A—C11—H11B108.0
N1—C1—H1A109.4C9—C12—H12A109.5
C2—C1—H1A109.4C9—C12—H12B109.5
N1—C1—H1B109.4H12A—C12—H12B109.5
C2—C1—H1B109.4C9—C12—H12C109.5
H1A—C1—H1B108.0H12A—C12—H12C109.5
C1—C2—C3111.25 (12)H12B—C12—H12C109.5
C1—C2—H2A109.4N1—C13—C14114.15 (12)
C3—C2—H2A109.4N1—C13—H13A108.7
C1—C2—H2B109.4C14—C13—H13A108.7
C3—C2—H2B109.4N1—C13—H13B108.7
H2A—C2—H2B108.0C14—C13—H13B108.7
C2—C3—C4108.91 (12)H13A—C13—H13B107.6
C2—C3—C6112.03 (13)C15—C14—C13176.56 (16)
C4—C3—C6112.04 (13)C14—C15—C16175.24 (15)
C2—C3—H3A107.9C17—C16—C27118.45 (13)
C4—C3—H3A107.9C17—C16—C15122.39 (13)
C6—C3—H3A107.9C27—C16—C15119.14 (13)
C5—C4—C3110.95 (12)C18—C17—C16120.54 (13)
C5—C4—H4A109.4C18—C17—H17A119.7
C3—C4—H4A109.4C16—C17—H17A119.7
C5—C4—H4B109.4C17—C18—C19121.25 (14)
C3—C4—H4B109.4C17—C18—H18A119.4
H4A—C4—H4B108.0C19—C18—H18A119.4
N1—C5—C4110.99 (12)C28—C19—C18117.53 (13)
N1—C5—H5A109.4C28—C19—C20120.70 (13)
C4—C5—H5A109.4C18—C19—C20121.75 (13)
N1—C5—H5B109.4C29—C20—C21117.70 (13)
C4—C5—H5B109.4C29—C20—C19121.51 (13)
H5A—C5—H5B108.0C21—C20—C19120.79 (13)
C3—C6—H6A109.5C22—C21—C20121.44 (14)
C3—C6—H6B109.5C22—C21—H21A119.3
H6A—C6—H6B109.5C20—C21—H21A119.3
C3—C6—H6C109.5C21—C22—C23120.46 (14)
H6A—C6—H6C109.5C21—C22—H22A119.8
H6B—C6—H6C109.5C23—C22—H22A119.8
N2—C7—C8110.85 (12)C22—C23—C30118.49 (13)
N2—C7—H7A109.5C22—C23—C24122.66 (13)
C8—C7—H7A109.5C30—C23—C24118.85 (14)
N2—C7—H7B109.5C25—C24—C23175.97 (16)
C8—C7—H7B109.5C24—C25—C26179.41 (16)
H7A—C7—H7B108.1N2—C26—C25114.80 (12)
C7—C8—C9111.25 (12)N2—C26—H26A108.6
C7—C8—H8A109.4C25—C26—H26A108.6
C9—C8—H8A109.4N2—C26—H26B108.6
C7—C8—H8B109.4C25—C26—H26B108.6
C9—C8—H8B109.4H26A—C26—H26B107.5
H8A—C8—H8B108.0C28—C27—C16120.67 (14)
C10—C9—C12112.14 (13)C28—C27—H27A119.7
C10—C9—C8108.91 (12)C16—C27—H27A119.7
C12—C9—C8111.96 (12)C27—C28—C19121.47 (14)
C10—C9—H9A107.9C27—C28—H28A119.3
C12—C9—H9A107.9C19—C28—H28A119.3
C8—C9—H9A107.9C30—C29—C20120.84 (14)
C9—C10—C11111.35 (12)C30—C29—H29A119.6
C9—C10—H10A109.4C20—C29—H29A119.6
C11—C10—H10A109.4C29—C30—C23121.06 (14)
C9—C10—H10B109.4C29—C30—H30A119.5
C11—C10—H10B109.4C23—C30—H30A119.5
C5—N1—C1—C258.26 (15)C16—C17—C18—C190.1 (2)
C13—N1—C1—C2−178.52 (12)C17—C18—C19—C282.4 (2)
N1—C1—C2—C3−56.80 (17)C17—C18—C19—C20−176.17 (13)
C1—C2—C3—C454.60 (16)C28—C19—C20—C29154.84 (14)
C1—C2—C3—C6179.11 (12)C18—C19—C20—C29−26.7 (2)
C2—C3—C4—C5−54.81 (16)C28—C19—C20—C21−26.0 (2)
C6—C3—C4—C5−179.30 (12)C18—C19—C20—C21152.48 (14)
C1—N1—C5—C4−58.59 (15)C29—C20—C21—C22−0.5 (2)
C13—N1—C5—C4178.08 (12)C19—C20—C21—C22−179.67 (14)
C3—C4—C5—N157.36 (17)C20—C21—C22—C23−0.2 (2)
C11—N2—C7—C8−59.31 (15)C21—C22—C23—C300.7 (2)
C26—N2—C7—C8176.95 (12)C21—C22—C23—C24−178.97 (14)
N2—C7—C8—C957.45 (17)C7—N2—C26—C2561.28 (17)
C7—C8—C9—C10−54.19 (16)C11—N2—C26—C25−62.40 (17)
C7—C8—C9—C12−178.78 (12)C17—C16—C27—C282.4 (2)
C12—C9—C10—C11178.51 (12)C15—C16—C27—C28−176.02 (13)
C8—C9—C10—C1154.03 (16)C16—C27—C28—C190.0 (2)
C7—N2—C11—C1059.11 (15)C18—C19—C28—C27−2.4 (2)
C26—N2—C11—C10−177.12 (12)C20—C19—C28—C27176.14 (13)
C9—C10—C11—N2−57.14 (17)C21—C20—C29—C300.7 (2)
C5—N1—C13—C1461.90 (17)C19—C20—C29—C30179.85 (13)
C1—N1—C13—C14−61.79 (17)C20—C29—C30—C23−0.2 (2)
C27—C16—C17—C18−2.5 (2)C22—C23—C30—C29−0.5 (2)
C15—C16—C17—C18175.94 (14)C24—C23—C30—C29179.17 (13)
C36H48N2F(000) = 556
Mr = 508.76Dx = 1.104 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54178 Å
a = 16.0591 (3) ÅCell parameters from 8231 reflections
b = 6.2267 (1) Åθ = 2.8–67.9°
c = 15.5921 (3) ŵ = 0.47 mm1
β = 100.895 (1)°T = 90 K
V = 1531.03 (5) Å3Needle, colourless
Z = 20.22 × 0.04 × 0.03 mm
Bruker X8 Proteum diffractometer2797 independent reflections
Radiation source: fine-focus rotating anode2405 reflections with I > 2σ(I)
Detector resolution: 5.6 pixels mm-1Rint = 0.053
φ and ω scansθmax = 68.2°, θmin = 2.8°
Absorption correction: multi-scan (SADABS; Bruker, 2006)h = −19→18
Tmin = 0.767, Tmax = 0.929k = −7→7
19631 measured reflectionsl = −7→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.050Hydrogen site location: difference Fourier map
wR(F2) = 0.137H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0655P)2 + 0.6795P] where P = (Fo2 + 2Fc2)/3
2797 reflections(Δ/σ)max < 0.001
176 parametersΔρmax = 0.24 e Å3
0 restraintsΔρmin = −0.24 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement progress was checked using PLATON (Spek, 2009) and by an R-tensor (Parkin, 2000). The final model was further checked with the IUCr utility checkCIF.
xyzUiso*/Ueq
N10.78341 (8)0.0593 (2)0.79190 (7)0.0251 (3)
C10.83571 (10)−0.0569 (3)0.73835 (10)0.0282 (4)
C20.92701 (10)0.0213 (3)0.76309 (11)0.0362 (4)
H2A0.9634−0.06960.73330.043*
H2B0.93030.17030.74180.043*
C30.96116 (11)0.0163 (3)0.86058 (12)0.0459 (5)
H3A1.01970.07340.87320.055*
H3B0.9623−0.13340.88220.055*
C40.90420 (12)0.1523 (3)0.90597 (11)0.0450 (5)
H4A0.90720.30340.88690.054*
H4B0.92580.14720.96980.054*
C50.81150 (11)0.0802 (3)0.88750 (9)0.0344 (4)
C60.69196 (10)0.0225 (3)0.76398 (11)0.0311 (4)
H6A0.6669−0.01100.81580.037*
H6B0.6829−0.10310.72440.037*
C70.64850 (9)0.2102 (3)0.71880 (10)0.0315 (4)
C80.61556 (10)0.3635 (3)0.68003 (10)0.0321 (4)
C90.58105 (9)0.5448 (3)0.62925 (10)0.0306 (4)
C100.52059 (11)0.6782 (3)0.65485 (12)0.0408 (4)
H10A0.50070.64870.70730.049*
C110.48936 (11)0.8531 (3)0.60457 (12)0.0401 (4)
H11A0.44780.94090.62320.048*
C120.51674 (9)0.9061 (3)0.52692 (10)0.0301 (4)
C130.57751 (13)0.7705 (4)0.50380 (12)0.0497 (5)
H13A0.59810.79970.45170.060*
C140.60900 (12)0.5960 (4)0.55329 (12)0.0478 (5)
H14A0.65090.50860.53490.057*
C150.80502 (11)0.0062 (3)0.64265 (10)0.0361 (4)
H15A0.80230.16300.63770.054*
H15B0.7485−0.05450.62170.054*
H15C0.8446−0.04960.60730.054*
C160.83244 (12)−0.3037 (3)0.74548 (12)0.0384 (4)
H16A0.8630−0.34870.80310.058*
H16B0.8590−0.36850.70010.058*
H16C0.7732−0.35050.73780.058*
C170.80193 (14)−0.1264 (3)0.93930 (11)0.0456 (5)
H17A0.8451−0.23070.93010.068*
H17B0.7454−0.18750.91900.068*
H17C0.8092−0.09221.00160.068*
C180.75837 (15)0.2577 (3)0.91871 (11)0.0477 (5)
H18A0.75860.38500.88180.072*
H18B0.78250.29450.97940.072*
H18C0.70000.20710.91490.072*
U11U22U33U12U13U23
N10.0261 (6)0.0330 (7)0.0174 (6)−0.0037 (5)0.0076 (5)0.0001 (5)
C10.0288 (8)0.0347 (8)0.0231 (7)0.0026 (6)0.0103 (6)0.0023 (6)
C20.0262 (8)0.0442 (10)0.0398 (9)0.0021 (7)0.0102 (7)0.0145 (8)
C30.0311 (9)0.0553 (12)0.0456 (10)−0.0071 (8)−0.0075 (8)0.0224 (9)
C40.0568 (11)0.0472 (11)0.0241 (8)−0.0167 (9)−0.0104 (7)0.0098 (7)
C50.0508 (10)0.0364 (9)0.0169 (7)−0.0088 (7)0.0088 (6)0.0027 (6)
C60.0267 (8)0.0330 (8)0.0359 (8)−0.0049 (6)0.0120 (6)−0.0015 (7)
C70.0241 (7)0.0389 (9)0.0335 (8)−0.0034 (7)0.0103 (6)−0.0075 (7)
C80.0243 (7)0.0387 (9)0.0347 (8)−0.0037 (7)0.0092 (6)−0.0092 (7)
C90.0217 (7)0.0372 (9)0.0325 (8)−0.0017 (6)0.0040 (6)−0.0091 (7)
C100.0374 (9)0.0434 (10)0.0475 (10)0.0033 (8)0.0227 (8)−0.0001 (8)
C110.0343 (9)0.0417 (10)0.0500 (10)0.0072 (7)0.0222 (8)−0.0021 (8)
C120.0222 (7)0.0376 (9)0.0306 (8)−0.0012 (6)0.0048 (6)−0.0111 (7)
C130.0514 (11)0.0697 (14)0.0335 (9)0.0281 (10)0.0221 (8)0.0066 (9)
C140.0464 (11)0.0649 (13)0.0363 (9)0.0264 (9)0.0186 (8)0.0009 (9)
C150.0453 (10)0.0444 (10)0.0203 (7)0.0054 (8)0.0105 (7)−0.0009 (7)
C160.0436 (10)0.0342 (9)0.0400 (9)0.0042 (7)0.0148 (7)0.0009 (7)
C170.0688 (13)0.0434 (11)0.0286 (8)−0.0070 (9)0.0193 (8)0.0090 (8)
C180.0838 (15)0.0393 (10)0.0254 (8)−0.0073 (10)0.0239 (9)−0.0047 (7)
N1—C61.4688 (19)C9—C101.392 (2)
N1—C51.4793 (18)C10—C111.380 (3)
N1—C11.4804 (19)C10—H10A0.9500
C1—C21.524 (2)C11—C121.403 (2)
C1—C151.532 (2)C11—H11A0.9500
C1—C161.542 (2)C12—C131.389 (2)
C2—C31.516 (2)C12—C12i1.480 (3)
C2—H2A0.9900C13—C141.373 (3)
C2—H2B0.9900C13—H13A0.9500
C3—C41.517 (3)C14—H14A0.9500
C3—H3A0.9900C15—H15A0.9800
C3—H3B0.9900C15—H15B0.9800
C4—C51.529 (2)C15—H15C0.9800
C4—H4A0.9900C16—H16A0.9800
C4—H4B0.9900C16—H16B0.9800
C5—C181.531 (3)C16—H16C0.9800
C5—C171.542 (2)C17—H17A0.9800
C6—C71.471 (2)C17—H17B0.9800
C6—H6A0.9900C17—H17C0.9800
C6—H6B0.9900C18—H18A0.9800
C7—C81.198 (2)C18—H18B0.9800
C8—C91.429 (2)C18—H18C0.9800
C9—C141.381 (2)
C6—N1—C5114.19 (12)C14—C9—C8120.16 (15)
C6—N1—C1113.49 (12)C10—C9—C8122.07 (15)
C5—N1—C1120.92 (13)C11—C10—C9120.43 (16)
N1—C1—C2108.79 (13)C11—C10—H10A119.8
N1—C1—C15108.16 (12)C9—C10—H10A119.8
C2—C1—C15106.36 (13)C10—C11—C12122.43 (15)
N1—C1—C16114.57 (13)C10—C11—H11A118.8
C2—C1—C16110.15 (14)C12—C11—H11A118.8
C15—C1—C16108.47 (14)C13—C12—C11115.55 (16)
C3—C2—C1113.30 (13)C13—C12—C12i122.06 (18)
C3—C2—H2A108.9C11—C12—C12i122.39 (17)
C1—C2—H2A108.9C14—C13—C12122.53 (16)
C3—C2—H2B108.9C14—C13—H13A118.7
C1—C2—H2B108.9C12—C13—H13A118.7
H2A—C2—H2B107.7C13—C14—C9121.32 (16)
C2—C3—C4108.70 (14)C13—C14—H14A119.3
C2—C3—H3A109.9C9—C14—H14A119.3
C4—C3—H3A109.9C1—C15—H15A109.5
C2—C3—H3B109.9C1—C15—H15B109.5
C4—C3—H3B109.9H15A—C15—H15B109.5
H3A—C3—H3B108.3C1—C15—H15C109.5
C3—C4—C5113.55 (15)H15A—C15—H15C109.5
C3—C4—H4A108.9H15B—C15—H15C109.5
C5—C4—H4A108.9C1—C16—H16A109.5
C3—C4—H4B108.9C1—C16—H16B109.5
C5—C4—H4B108.9H16A—C16—H16B109.5
H4A—C4—H4B107.7C1—C16—H16C109.5
N1—C5—C4108.43 (12)H16A—C16—H16C109.5
N1—C5—C18107.54 (14)H16B—C16—H16C109.5
C4—C5—C18108.02 (15)C5—C17—H17A109.5
N1—C5—C17114.40 (14)C5—C17—H17B109.5
C4—C5—C17109.65 (15)H17A—C17—H17B109.5
C18—C5—C17108.61 (14)C5—C17—H17C109.5
N1—C6—C7112.04 (13)H17A—C17—H17C109.5
N1—C6—H6A109.2H17B—C17—H17C109.5
C7—C6—H6A109.2C5—C18—H18A109.5
N1—C6—H6B109.2C5—C18—H18B109.5
C7—C6—H6B109.2H18A—C18—H18B109.5
H6A—C6—H6B107.9C5—C18—H18C109.5
C8—C7—C6177.40 (16)H18A—C18—H18C109.5
C7—C8—C9175.42 (16)H18B—C18—H18C109.5
C14—C9—C10117.74 (16)
C6—N1—C1—C2170.72 (12)C1—N1—C5—C17−75.06 (19)
C5—N1—C1—C2−47.93 (18)C3—C4—C5—N1−50.81 (19)
C6—N1—C1—C1555.59 (17)C3—C4—C5—C18−167.07 (14)
C5—N1—C1—C15−163.06 (14)C3—C4—C5—C1774.74 (17)
C6—N1—C1—C16−65.52 (17)C5—N1—C6—C7109.77 (15)
C5—N1—C1—C1675.83 (18)C1—N1—C6—C7−106.21 (15)
N1—C1—C2—C351.04 (19)C14—C9—C10—C111.0 (3)
C15—C1—C2—C3167.34 (15)C8—C9—C10—C11179.33 (16)
C16—C1—C2—C3−75.31 (19)C9—C10—C11—C12−0.6 (3)
C1—C2—C3—C4−57.6 (2)C10—C11—C12—C130.0 (3)
C2—C3—C4—C557.58 (19)C10—C11—C12—C12i−179.94 (18)
C6—N1—C5—C4−171.25 (14)C11—C12—C13—C140.0 (3)
C1—N1—C5—C447.65 (19)C12i—C12—C13—C14180.0 (2)
C6—N1—C5—C18−54.69 (17)C12—C13—C14—C90.5 (3)
C1—N1—C5—C18164.21 (14)C10—C9—C14—C13−0.9 (3)
C6—N1—C5—C1766.04 (19)C8—C9—C14—C13−179.33 (18)
  8 in total

1.  Expansion of scalar validation criteria to three dimensions: the R tensor

Authors: 
Journal:  Acta Crystallogr A       Date:  2000-03       Impact factor: 2.290

2.  Retrieval of crystallographically-derived molecular geometry information.

Authors:  Ian J Bruno; Jason C Cole; Magnus Kessler; Jie Luo; W D Sam Motherwell; Lucy H Purkis; Barry R Smith; Robin Taylor; Richard I Cooper; Stephanie E Harris; A Guy Orpen
Journal:  J Chem Inf Comput Sci       Date:  2004 Nov-Dec

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Novel small molecule α9α10 nicotinic receptor antagonist prevents and reverses chemotherapy-evoked neuropathic pain in rats.

Authors:  Elzbieta P Wala; Peter A Crooks; J Michael McIntosh; Joseph R Holtman
Journal:  Anesth Analg       Date:  2012-05-18       Impact factor: 5.108

5.  The Cambridge Structural Database in retrospect and prospect.

Authors:  Colin R Groom; Frank H Allen
Journal:  Angew Chem Int Ed Engl       Date:  2014-01-02       Impact factor: 15.336

6.  Discovery of non-peptide, small molecule antagonists of α9α10 nicotinic acetylcholine receptors as novel analgesics for the treatment of neuropathic and tonic inflammatory pain.

Authors:  Guangrong Zheng; Zhenfa Zhang; Cheryl Dowell; Elzbieta Wala; Linda P Dwoskin; Joseph R Holtman; J Michael McIntosh; Peter A Crooks
Journal:  Bioorg Med Chem Lett       Date:  2011-02-23       Impact factor: 2.823

7.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

8.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  8 in total

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